Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ALDH1A1P00352 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.57■■□□□ 1.84
ALDH1A1P00352 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
ALDH1A1P00352 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ALDH1A1P00352 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
ALDH1A1P00352 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.56■■□□□ 1.84
ALDH1A1P00352 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.56■■□□□ 1.84
ALDH1A1P00352 TSPY26P-201ENST00000476365 1326 ntBASIC26.56■■□□□ 1.84
ALDH1A1P00352 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ALDH1A1P00352 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ALDH1A1P00352 AC131274.2-201ENST00000580697 1507 ntBASIC26.55■■□□□ 1.84
ALDH1A1P00352 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
ALDH1A1P00352 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.55■■□□□ 1.84
ALDH1A1P00352 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ALDH1A1P00352 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ALDH1A1P00352 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
ALDH1A1P00352 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
ALDH1A1P00352 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.54■■□□□ 1.84
ALDH1A1P00352 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ALDH1A1P00352 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ALDH1A1P00352 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.53■■□□□ 1.84
ALDH1A1P00352 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC26.53■■□□□ 1.84
ALDH1A1P00352 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC26.53■■□□□ 1.84
ALDH1A1P00352 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
ALDH1A1P00352 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ALDH1A1P00352 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
ALDH1A1P00352 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
ALDH1A1P00352 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
ALDH1A1P00352 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ALDH1A1P00352 HLA-L-209ENST00000420110 1011 ntBASIC26.52■■□□□ 1.84
ALDH1A1P00352 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
ALDH1A1P00352 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.52■■□□□ 1.84
ALDH1A1P00352 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC26.52■■□□□ 1.84
ALDH1A1P00352 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
ALDH1A1P00352 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.51■■□□□ 1.83
ALDH1A1P00352 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ALDH1A1P00352 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
ALDH1A1P00352 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.51■■□□□ 1.83
ALDH1A1P00352 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ALDH1A1P00352 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
ALDH1A1P00352 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ALDH1A1P00352 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ALDH1A1P00352 NTF6G-201ENST00000591094 616 ntBASIC26.5■■□□□ 1.83
ALDH1A1P00352 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
ALDH1A1P00352 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
ALDH1A1P00352 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
ALDH1A1P00352 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ALDH1A1P00352 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
ALDH1A1P00352 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.49■■□□□ 1.83
ALDH1A1P00352 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.49■■□□□ 1.83
ALDH1A1P00352 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC26.49■■□□□ 1.83
ALDH1A1P00352 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
ALDH1A1P00352 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.49■■□□□ 1.83
ALDH1A1P00352 AL354811.1-201ENST00000610286 706 ntBASIC26.49■■□□□ 1.83
ALDH1A1P00352 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
ALDH1A1P00352 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.48■■□□□ 1.83
ALDH1A1P00352 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
ALDH1A1P00352 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.48■■□□□ 1.83
ALDH1A1P00352 CCDC92B-201ENST00000575506 885 ntBASIC26.48■■□□□ 1.83
ALDH1A1P00352 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.48■■□□□ 1.83
ALDH1A1P00352 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ALDH1A1P00352 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
ALDH1A1P00352 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ALDH1A1P00352 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ALDH1A1P00352 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ALDH1A1P00352 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
ALDH1A1P00352 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
ALDH1A1P00352 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
ALDH1A1P00352 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC26.47■■□□□ 1.83
ALDH1A1P00352 MIR572-201ENST00000384983 95 ntBASIC26.47■■□□□ 1.83
ALDH1A1P00352 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ALDH1A1P00352 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.47■■□□□ 1.83
ALDH1A1P00352 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
ALDH1A1P00352 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
ALDH1A1P00352 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.47■■□□□ 1.83
ALDH1A1P00352 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ALDH1A1P00352 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
ALDH1A1P00352 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ALDH1A1P00352 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
ALDH1A1P00352 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ALDH1A1P00352 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ALDH1A1P00352 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.46■■□□□ 1.83
ALDH1A1P00352 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
ALDH1A1P00352 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.46■■□□□ 1.83
ALDH1A1P00352 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
ALDH1A1P00352 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.45■■□□□ 1.82
ALDH1A1P00352 AC012414.1-201ENST00000556676 535 ntBASIC26.45■■□□□ 1.82
ALDH1A1P00352 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.45■■□□□ 1.82
ALDH1A1P00352 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC26.45■■□□□ 1.82
ALDH1A1P00352 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.45■■□□□ 1.82
ALDH1A1P00352 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
ALDH1A1P00352 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ALDH1A1P00352 IGHV3-19-201ENST00000521488 291 ntBASIC26.44■■□□□ 1.82
ALDH1A1P00352 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC26.44■■□□□ 1.82
ALDH1A1P00352 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ALDH1A1P00352 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
ALDH1A1P00352 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.43■■□□□ 1.82
ALDH1A1P00352 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ALDH1A1P00352 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
ALDH1A1P00352 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms