Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TOMM40O96008 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOMM40O96008 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.83■□□□□ 0.45
TOMM40O96008 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TOMM40O96008 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TOMM40O96008 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
TOMM40O96008 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.83■□□□□ 0.45
TOMM40O96008 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.83■□□□□ 0.45
TOMM40O96008 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TOMM40O96008 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TOMM40O96008 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.83■□□□□ 0.44
TOMM40O96008 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TOMM40O96008 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOMM40O96008 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TOMM40O96008 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOMM40O96008 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TOMM40O96008 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.82■□□□□ 0.44
TOMM40O96008 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.82■□□□□ 0.44
TOMM40O96008 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOMM40O96008 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOMM40O96008 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOMM40O96008 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TOMM40O96008 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOMM40O96008 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TOMM40O96008 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TOMM40O96008 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TOMM40O96008 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.81■□□□□ 0.44
TOMM40O96008 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.81■□□□□ 0.44
TOMM40O96008 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.81■□□□□ 0.44
TOMM40O96008 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.81■□□□□ 0.44
TOMM40O96008 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TOMM40O96008 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TOMM40O96008 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TOMM40O96008 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TOMM40O96008 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.8■□□□□ 0.44
TOMM40O96008 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TOMM40O96008 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TOMM40O96008 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TOMM40O96008 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TOMM40O96008 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TOMM40O96008 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TOMM40O96008 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.79■□□□□ 0.44
TOMM40O96008 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOMM40O96008 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOMM40O96008 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOMM40O96008 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOMM40O96008 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOMM40O96008 KRT18P60-201ENST00000312876 1297 ntBASIC17.79■□□□□ 0.44
TOMM40O96008 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TOMM40O96008 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.79■□□□□ 0.44
TOMM40O96008 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.79■□□□□ 0.44
TOMM40O96008 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.79■□□□□ 0.44
TOMM40O96008 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.79■□□□□ 0.44
TOMM40O96008 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.79■□□□□ 0.44
TOMM40O96008 AC011551.1-201ENST00000614101 683 ntBASIC17.79■□□□□ 0.44
TOMM40O96008 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TOMM40O96008 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TOMM40O96008 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.79■□□□□ 0.44
TOMM40O96008 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TOMM40O96008 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOMM40O96008 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOMM40O96008 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TOMM40O96008 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TOMM40O96008 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.78■□□□□ 0.44
TOMM40O96008 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOMM40O96008 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOMM40O96008 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOMM40O96008 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOMM40O96008 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOMM40O96008 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.78■□□□□ 0.44
TOMM40O96008 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TOMM40O96008 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.78■□□□□ 0.44
TOMM40O96008 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TOMM40O96008 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TOMM40O96008 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TOMM40O96008 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TOMM40O96008 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
TOMM40O96008 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOMM40O96008 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.77■□□□□ 0.44
TOMM40O96008 AL022069.1-201ENST00000568025 1636 ntBASIC17.77■□□□□ 0.44
TOMM40O96008 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOMM40O96008 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOMM40O96008 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TOMM40O96008 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOMM40O96008 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOMM40O96008 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TOMM40O96008 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOMM40O96008 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOMM40O96008 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.77■□□□□ 0.43
TOMM40O96008 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TOMM40O96008 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TOMM40O96008 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TOMM40O96008 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TOMM40O96008 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TOMM40O96008 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.76■□□□□ 0.43
TOMM40O96008 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TOMM40O96008 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.76■□□□□ 0.43
TOMM40O96008 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TOMM40O96008 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TOMM40O96008 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms