Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CTDNEP1O95476 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CTDNEP1O95476 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CTDNEP1O95476 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CTDNEP1O95476 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.67■■□□□ 1.86
CTDNEP1O95476 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CTDNEP1O95476 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.67■■□□□ 1.86
CTDNEP1O95476 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.67■■□□□ 1.86
CTDNEP1O95476 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CTDNEP1O95476 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CTDNEP1O95476 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
CTDNEP1O95476 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
CTDNEP1O95476 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.66■■□□□ 1.86
CTDNEP1O95476 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CTDNEP1O95476 YBX1P4-201ENST00000392794 808 ntBASIC26.65■■□□□ 1.86
CTDNEP1O95476 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.65■■□□□ 1.86
CTDNEP1O95476 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CTDNEP1O95476 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.65■■□□□ 1.86
CTDNEP1O95476 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CTDNEP1O95476 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
CTDNEP1O95476 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.64■■□□□ 1.86
CTDNEP1O95476 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
CTDNEP1O95476 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.64■■□□□ 1.86
CTDNEP1O95476 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
CTDNEP1O95476 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.64■■□□□ 1.86
CTDNEP1O95476 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
CTDNEP1O95476 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.85
CTDNEP1O95476 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
CTDNEP1O95476 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
CTDNEP1O95476 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
CTDNEP1O95476 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CTDNEP1O95476 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.63■■□□□ 1.85
CTDNEP1O95476 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.63■■□□□ 1.85
CTDNEP1O95476 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.63■■□□□ 1.85
CTDNEP1O95476 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CTDNEP1O95476 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.63■■□□□ 1.85
CTDNEP1O95476 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CTDNEP1O95476 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CTDNEP1O95476 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CTDNEP1O95476 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CTDNEP1O95476 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CTDNEP1O95476 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CTDNEP1O95476 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
CTDNEP1O95476 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.62■■□□□ 1.85
CTDNEP1O95476 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
CTDNEP1O95476 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.62■■□□□ 1.85
CTDNEP1O95476 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.62■■□□□ 1.85
CTDNEP1O95476 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
CTDNEP1O95476 ALDH1A3-203ENST00000557963 1670 ntBASIC26.61■■□□□ 1.85
CTDNEP1O95476 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CTDNEP1O95476 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CTDNEP1O95476 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.61■■□□□ 1.85
CTDNEP1O95476 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CTDNEP1O95476 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CTDNEP1O95476 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CTDNEP1O95476 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CTDNEP1O95476 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.6■■□□□ 1.85
CTDNEP1O95476 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CTDNEP1O95476 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.6■■□□□ 1.85
CTDNEP1O95476 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.6■■□□□ 1.85
CTDNEP1O95476 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.6■■□□□ 1.85
CTDNEP1O95476 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CTDNEP1O95476 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CTDNEP1O95476 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CTDNEP1O95476 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.59■■□□□ 1.85
CTDNEP1O95476 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
CTDNEP1O95476 AC004448.1-201ENST00000458332 883 ntBASIC26.59■■□□□ 1.85
CTDNEP1O95476 AL031848.2-201ENST00000607670 837 ntBASIC26.59■■□□□ 1.85
CTDNEP1O95476 DUSP8P5-201ENST00000422884 1815 ntBASIC26.59■■□□□ 1.85
CTDNEP1O95476 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CTDNEP1O95476 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
CTDNEP1O95476 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CTDNEP1O95476 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
CTDNEP1O95476 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.59■■□□□ 1.85
CTDNEP1O95476 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CTDNEP1O95476 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CTDNEP1O95476 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.58■■□□□ 1.85
CTDNEP1O95476 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CTDNEP1O95476 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CTDNEP1O95476 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CTDNEP1O95476 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
CTDNEP1O95476 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.57■■□□□ 1.84
CTDNEP1O95476 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CTDNEP1O95476 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CTDNEP1O95476 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CTDNEP1O95476 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
CTDNEP1O95476 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.57■■□□□ 1.84
CTDNEP1O95476 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CTDNEP1O95476 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CTDNEP1O95476 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.57■■□□□ 1.84
CTDNEP1O95476 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
CTDNEP1O95476 AC137630.3-201ENST00000607245 391 ntBASIC26.57■■□□□ 1.84
CTDNEP1O95476 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.57■■□□□ 1.84
CTDNEP1O95476 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.57■■□□□ 1.84
CTDNEP1O95476 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CTDNEP1O95476 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.57■■□□□ 1.84
CTDNEP1O95476 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CTDNEP1O95476 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
CTDNEP1O95476 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CTDNEP1O95476 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms