Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCAF4O95104 ABCB10P4-201ENST00000566803 2184 ntBASIC18.58■□□□□ 0.57
SCAF4O95104 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCAF4O95104 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCAF4O95104 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCAF4O95104 RARRES2P2-201ENST00000394842 485 ntBASIC18.58■□□□□ 0.56
SCAF4O95104 AC092296.2-201ENST00000589470 999 ntBASIC18.58■□□□□ 0.56
SCAF4O95104 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCAF4O95104 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCAF4O95104 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCAF4O95104 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SCAF4O95104 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCAF4O95104 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.58■□□□□ 0.56
SCAF4O95104 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.58■□□□□ 0.56
SCAF4O95104 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCAF4O95104 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.58■□□□□ 0.56
SCAF4O95104 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCAF4O95104 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.57■□□□□ 0.56
SCAF4O95104 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.57■□□□□ 0.56
SCAF4O95104 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SCAF4O95104 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
SCAF4O95104 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCAF4O95104 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.57■□□□□ 0.56
SCAF4O95104 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.57■□□□□ 0.56
SCAF4O95104 MIR3960-201ENST00000583311 91 ntBASIC18.57■□□□□ 0.56
SCAF4O95104 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.57■□□□□ 0.56
SCAF4O95104 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCAF4O95104 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.57■□□□□ 0.56
SCAF4O95104 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCAF4O95104 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SCAF4O95104 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCAF4O95104 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
SCAF4O95104 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCAF4O95104 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.56■□□□□ 0.56
SCAF4O95104 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SCAF4O95104 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCAF4O95104 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.56■□□□□ 0.56
SCAF4O95104 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCAF4O95104 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.56■□□□□ 0.56
SCAF4O95104 KRT18P10-201ENST00000388836 1287 ntBASIC18.56■□□□□ 0.56
SCAF4O95104 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCAF4O95104 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCAF4O95104 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCAF4O95104 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCAF4O95104 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCAF4O95104 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SCAF4O95104 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCAF4O95104 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.55■□□□□ 0.56
SCAF4O95104 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCAF4O95104 ECEL1P2-201ENST00000461596 1295 ntBASIC18.55■□□□□ 0.56
SCAF4O95104 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.55■□□□□ 0.56
SCAF4O95104 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.55■□□□□ 0.56
SCAF4O95104 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.55■□□□□ 0.56
SCAF4O95104 EP400NL-214ENST00000641289 2402 ntBASIC18.55■□□□□ 0.56
SCAF4O95104 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCAF4O95104 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCAF4O95104 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCAF4O95104 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SCAF4O95104 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.55■□□□□ 0.56
SCAF4O95104 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCAF4O95104 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SCAF4O95104 AL024507.2-201ENST00000606070 2574 ntBASIC18.54■□□□□ 0.56
SCAF4O95104 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SCAF4O95104 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.54■□□□□ 0.56
SCAF4O95104 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SCAF4O95104 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.54■□□□□ 0.56
SCAF4O95104 AC025884.2-201ENST00000553429 711 ntBASIC18.54■□□□□ 0.56
SCAF4O95104 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCAF4O95104 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCAF4O95104 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCAF4O95104 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCAF4O95104 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SCAF4O95104 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SCAF4O95104 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCAF4O95104 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCAF4O95104 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCAF4O95104 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCAF4O95104 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCAF4O95104 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCAF4O95104 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCAF4O95104 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SCAF4O95104 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SCAF4O95104 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SCAF4O95104 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SCAF4O95104 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCAF4O95104 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCAF4O95104 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCAF4O95104 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCAF4O95104 SMPD5-203ENST00000639008 1464 ntBASIC18.52■□□□□ 0.56
SCAF4O95104 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.52■□□□□ 0.56
SCAF4O95104 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.52■□□□□ 0.56
SCAF4O95104 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.52■□□□□ 0.56
SCAF4O95104 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCAF4O95104 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.52■□□□□ 0.56
SCAF4O95104 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCAF4O95104 HLA-L-211ENST00000482052 1765 ntBASIC18.52■□□□□ 0.55
SCAF4O95104 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCAF4O95104 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
SCAF4O95104 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.51■□□□□ 0.55
SCAF4O95104 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms