Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALX3O95076 GPX1-201ENST00000419349 1106 ntBASIC20.09■□□□□ 0.81
ALX3O95076 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.09■□□□□ 0.81
ALX3O95076 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALX3O95076 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALX3O95076 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ALX3O95076 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.81
ALX3O95076 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ALX3O95076 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ALX3O95076 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ALX3O95076 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.08■□□□□ 0.81
ALX3O95076 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ALX3O95076 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALX3O95076 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALX3O95076 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.07■□□□□ 0.8
ALX3O95076 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.07■□□□□ 0.8
ALX3O95076 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ALX3O95076 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ALX3O95076 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALX3O95076 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ALX3O95076 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.07■□□□□ 0.8
ALX3O95076 HLA-L-211ENST00000482052 1765 ntBASIC20.07■□□□□ 0.8
ALX3O95076 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALX3O95076 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALX3O95076 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.06■□□□□ 0.8
ALX3O95076 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ALX3O95076 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ALX3O95076 AC004812.2-201ENST00000611079 2094 ntBASIC20.06■□□□□ 0.8
ALX3O95076 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALX3O95076 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALX3O95076 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.06■□□□□ 0.8
ALX3O95076 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.06■□□□□ 0.8
ALX3O95076 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ALX3O95076 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ALX3O95076 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ALX3O95076 AC137767.1-201ENST00000602918 1920 ntBASIC20.06■□□□□ 0.8
ALX3O95076 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.05■□□□□ 0.8
ALX3O95076 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALX3O95076 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ALX3O95076 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALX3O95076 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ALX3O95076 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALX3O95076 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ALX3O95076 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.05■□□□□ 0.8
ALX3O95076 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ALX3O95076 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALX3O95076 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALX3O95076 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ALX3O95076 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALX3O95076 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALX3O95076 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALX3O95076 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALX3O95076 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.05■□□□□ 0.8
ALX3O95076 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ALX3O95076 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALX3O95076 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.04■□□□□ 0.8
ALX3O95076 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALX3O95076 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALX3O95076 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ALX3O95076 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ALX3O95076 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ALX3O95076 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALX3O95076 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
ALX3O95076 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALX3O95076 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.04■□□□□ 0.8
ALX3O95076 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.04■□□□□ 0.8
ALX3O95076 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALX3O95076 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALX3O95076 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ALX3O95076 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALX3O95076 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.03■□□□□ 0.8
ALX3O95076 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ALX3O95076 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.03■□□□□ 0.8
ALX3O95076 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ALX3O95076 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALX3O95076 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.03■□□□□ 0.8
ALX3O95076 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALX3O95076 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALX3O95076 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ALX3O95076 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ALX3O95076 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ALX3O95076 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.02■□□□□ 0.8
ALX3O95076 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALX3O95076 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ALX3O95076 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
ALX3O95076 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALX3O95076 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALX3O95076 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ALX3O95076 AC007375.3-201ENST00000600936 2314 ntBASIC20.02■□□□□ 0.79
ALX3O95076 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ALX3O95076 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.01■□□□□ 0.79
ALX3O95076 AC009831.1-201ENST00000580420 1582 ntBASIC20.01■□□□□ 0.79
ALX3O95076 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALX3O95076 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ALX3O95076 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ALX3O95076 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ALX3O95076 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALX3O95076 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ALX3O95076 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.01■□□□□ 0.79
ALX3O95076 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms