Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
UPK1BO75841 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
UPK1BO75841 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
UPK1BO75841 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UPK1BO75841 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.03■□□□□ 0.8
UPK1BO75841 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPK1BO75841 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UPK1BO75841 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPK1BO75841 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.02■□□□□ 0.8
UPK1BO75841 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.02■□□□□ 0.8
UPK1BO75841 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.02■□□□□ 0.8
UPK1BO75841 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
UPK1BO75841 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UPK1BO75841 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
UPK1BO75841 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UPK1BO75841 AL391121.1-201ENST00000607967 1349 ntBASIC20.02■□□□□ 0.79
UPK1BO75841 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPK1BO75841 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UPK1BO75841 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UPK1BO75841 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPK1BO75841 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPK1BO75841 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPK1BO75841 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPK1BO75841 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPK1BO75841 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UPK1BO75841 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
UPK1BO75841 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
UPK1BO75841 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
UPK1BO75841 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20■□□□□ 0.79
UPK1BO75841 AC108673.1-201ENST00000510422 1159 ntBASIC20■□□□□ 0.79
UPK1BO75841 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
UPK1BO75841 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
UPK1BO75841 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
UPK1BO75841 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20■□□□□ 0.79
UPK1BO75841 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
UPK1BO75841 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20■□□□□ 0.79
UPK1BO75841 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
UPK1BO75841 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UPK1BO75841 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPK1BO75841 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPK1BO75841 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
UPK1BO75841 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPK1BO75841 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPK1BO75841 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPK1BO75841 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPK1BO75841 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.99■□□□□ 0.79
UPK1BO75841 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.98■□□□□ 0.79
UPK1BO75841 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
UPK1BO75841 RNF165-205ENST00000588679 2904 ntBASIC19.98■□□□□ 0.79
UPK1BO75841 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.98■□□□□ 0.79
UPK1BO75841 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.98■□□□□ 0.79
UPK1BO75841 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK1BO75841 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK1BO75841 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK1BO75841 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
UPK1BO75841 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK1BO75841 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
UPK1BO75841 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
UPK1BO75841 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPK1BO75841 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPK1BO75841 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.97■□□□□ 0.79
UPK1BO75841 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
UPK1BO75841 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
UPK1BO75841 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPK1BO75841 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.97■□□□□ 0.79
UPK1BO75841 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.97■□□□□ 0.79
UPK1BO75841 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPK1BO75841 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPK1BO75841 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPK1BO75841 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
UPK1BO75841 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPK1BO75841 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPK1BO75841 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPK1BO75841 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPK1BO75841 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
UPK1BO75841 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
UPK1BO75841 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UPK1BO75841 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.96■□□□□ 0.79
UPK1BO75841 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.96■□□□□ 0.79
UPK1BO75841 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
UPK1BO75841 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.95■□□□□ 0.78
UPK1BO75841 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPK1BO75841 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.95■□□□□ 0.78
UPK1BO75841 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
UPK1BO75841 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
UPK1BO75841 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.95■□□□□ 0.78
UPK1BO75841 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPK1BO75841 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPK1BO75841 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
UPK1BO75841 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
UPK1BO75841 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
UPK1BO75841 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.95■□□□□ 0.78
UPK1BO75841 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPK1BO75841 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
UPK1BO75841 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UPK1BO75841 FBXW4P1-201ENST00000426721 2239 ntBASIC19.94■□□□□ 0.78
UPK1BO75841 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.94■□□□□ 0.78
UPK1BO75841 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK1BO75841 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
UPK1BO75841 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms