Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SUPT3HO75486 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.55■■□□□ 1.2
SUPT3HO75486 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SUPT3HO75486 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.55■■□□□ 1.2
SUPT3HO75486 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SUPT3HO75486 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SUPT3HO75486 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.54■■□□□ 1.2
SUPT3HO75486 AC011551.1-201ENST00000614101 683 ntBASIC22.54■■□□□ 1.2
SUPT3HO75486 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SUPT3HO75486 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SUPT3HO75486 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SUPT3HO75486 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.54■■□□□ 1.2
SUPT3HO75486 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SUPT3HO75486 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SUPT3HO75486 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SUPT3HO75486 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SUPT3HO75486 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SUPT3HO75486 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SUPT3HO75486 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SUPT3HO75486 AC004987.1-201ENST00000428627 508 ntBASIC22.53■■□□□ 1.2
SUPT3HO75486 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SUPT3HO75486 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.53■■□□□ 1.2
SUPT3HO75486 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.53■■□□□ 1.2
SUPT3HO75486 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.53■■□□□ 1.2
SUPT3HO75486 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
SUPT3HO75486 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SUPT3HO75486 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SUPT3HO75486 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.53■■□□□ 1.2
SUPT3HO75486 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SUPT3HO75486 DUSP8P5-201ENST00000422884 1815 ntBASIC22.52■■□□□ 1.2
SUPT3HO75486 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SUPT3HO75486 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SUPT3HO75486 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SUPT3HO75486 ATP5G2P3-201ENST00000429083 425 ntBASIC22.52■■□□□ 1.2
SUPT3HO75486 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.52■■□□□ 1.2
SUPT3HO75486 AC019171.1-201ENST00000601251 1056 ntBASIC22.52■■□□□ 1.2
SUPT3HO75486 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SUPT3HO75486 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SUPT3HO75486 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SUPT3HO75486 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SUPT3HO75486 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.19
SUPT3HO75486 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
SUPT3HO75486 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SUPT3HO75486 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.51■■□□□ 1.19
SUPT3HO75486 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SUPT3HO75486 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SUPT3HO75486 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SUPT3HO75486 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.51■■□□□ 1.19
SUPT3HO75486 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SUPT3HO75486 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SUPT3HO75486 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.5■■□□□ 1.19
SUPT3HO75486 AL161729.1-201ENST00000604104 1402 ntBASIC22.5■■□□□ 1.19
SUPT3HO75486 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SUPT3HO75486 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SUPT3HO75486 AC022616.5-201ENST00000518796 181 ntBASIC22.5■■□□□ 1.19
SUPT3HO75486 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SUPT3HO75486 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SUPT3HO75486 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SUPT3HO75486 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SUPT3HO75486 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.49■■□□□ 1.19
SUPT3HO75486 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SUPT3HO75486 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
SUPT3HO75486 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.49■■□□□ 1.19
SUPT3HO75486 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.49■■□□□ 1.19
SUPT3HO75486 AL022069.1-201ENST00000568025 1636 ntBASIC22.49■■□□□ 1.19
SUPT3HO75486 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.48■■□□□ 1.19
SUPT3HO75486 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SUPT3HO75486 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SUPT3HO75486 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SUPT3HO75486 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
SUPT3HO75486 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.48■■□□□ 1.19
SUPT3HO75486 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.48■■□□□ 1.19
SUPT3HO75486 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SUPT3HO75486 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.48■■□□□ 1.19
SUPT3HO75486 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SUPT3HO75486 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SUPT3HO75486 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SUPT3HO75486 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
SUPT3HO75486 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SUPT3HO75486 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SUPT3HO75486 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SUPT3HO75486 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SUPT3HO75486 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.47■■□□□ 1.19
SUPT3HO75486 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
SUPT3HO75486 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SUPT3HO75486 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SUPT3HO75486 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
SUPT3HO75486 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.47■■□□□ 1.19
SUPT3HO75486 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SUPT3HO75486 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.47■■□□□ 1.19
SUPT3HO75486 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SUPT3HO75486 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SUPT3HO75486 TSPY13P-201ENST00000338964 914 ntBASIC22.46■■□□□ 1.19
SUPT3HO75486 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.46■■□□□ 1.19
SUPT3HO75486 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
SUPT3HO75486 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
SUPT3HO75486 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
SUPT3HO75486 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
SUPT3HO75486 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
SUPT3HO75486 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms