Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
PTCD1O75127 AC104564.3-201ENST00000582367 638 ntBASIC29.65■■■□□ 2.34
PTCD1O75127 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PTCD1O75127 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
PTCD1O75127 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC29.64■■■□□ 2.33
PTCD1O75127 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PTCD1O75127 AC008764.7-201ENST00000593779 1081 ntBASIC29.63■■■□□ 2.33
PTCD1O75127 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PTCD1O75127 AL022069.1-201ENST00000568025 1636 ntBASIC29.63■■■□□ 2.33
PTCD1O75127 CEBPA-AS1-201ENST00000592982 2198 ntBASIC29.63■■■□□ 2.33
PTCD1O75127 RASA4CP-201ENST00000424092 1398 ntBASIC29.63■■■□□ 2.33
PTCD1O75127 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC29.63■■■□□ 2.33
PTCD1O75127 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
PTCD1O75127 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
PTCD1O75127 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
PTCD1O75127 MIR6089-201ENST00000616698 64 ntBASIC29.62■■■□□ 2.33
PTCD1O75127 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
PTCD1O75127 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
PTCD1O75127 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
PTCD1O75127 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
PTCD1O75127 ANKRD20A6P-201ENST00000618763 204 ntBASIC29.61■■■□□ 2.33
PTCD1O75127 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PTCD1O75127 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
PTCD1O75127 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
PTCD1O75127 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC29.6■■■□□ 2.33
PTCD1O75127 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC29.6■■■□□ 2.33
PTCD1O75127 MIR6821-201ENST00000617625 74 ntBASIC29.6■■■□□ 2.33
PTCD1O75127 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
PTCD1O75127 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.59■■■□□ 2.33
PTCD1O75127 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
PTCD1O75127 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC29.59■■■□□ 2.33
PTCD1O75127 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
PTCD1O75127 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
PTCD1O75127 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC29.59■■■□□ 2.33
PTCD1O75127 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC29.59■■■□□ 2.33
PTCD1O75127 AC011298.3-201ENST00000615796 283 ntBASIC29.59■■■□□ 2.33
PTCD1O75127 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
PTCD1O75127 LSR-205ENST00000427250 1606 ntTSL 2 BASIC29.59■■■□□ 2.33
PTCD1O75127 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC29.59■■■□□ 2.33
PTCD1O75127 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
PTCD1O75127 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC29.58■■■□□ 2.33
PTCD1O75127 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
PTCD1O75127 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC29.58■■■□□ 2.33
PTCD1O75127 AC027682.1-201ENST00000562846 899 ntBASIC29.58■■■□□ 2.33
PTCD1O75127 AC087623.3-201ENST00000607047 1098 ntBASIC29.58■■■□□ 2.33
PTCD1O75127 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC29.58■■■□□ 2.33
PTCD1O75127 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC29.58■■■□□ 2.33
PTCD1O75127 C17orf82-201ENST00000623772 1530 ntBASIC29.58■■■□□ 2.33
PTCD1O75127 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC29.57■■■□□ 2.32
PTCD1O75127 DUSP8P4-201ENST00000399538 1761 ntBASIC29.57■■■□□ 2.32
PTCD1O75127 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC29.57■■■□□ 2.32
PTCD1O75127 AC097381.1-201ENST00000429019 1296 ntBASIC29.57■■■□□ 2.32
PTCD1O75127 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC29.57■■■□□ 2.32
PTCD1O75127 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC29.57■■■□□ 2.32
PTCD1O75127 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
PTCD1O75127 AC091060.1-201ENST00000623524 1766 ntBASIC29.57■■■□□ 2.32
PTCD1O75127 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PTCD1O75127 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PTCD1O75127 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PTCD1O75127 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
PTCD1O75127 AC099791.1-201ENST00000416440 715 ntBASIC29.56■■■□□ 2.32
PTCD1O75127 AC006455.2-201ENST00000429931 906 ntBASIC29.56■■■□□ 2.32
PTCD1O75127 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC29.56■■■□□ 2.32
PTCD1O75127 AL138724.1-201ENST00000606771 1088 ntBASIC29.56■■■□□ 2.32
PTCD1O75127 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PTCD1O75127 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
PTCD1O75127 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
PTCD1O75127 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
PTCD1O75127 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC29.55■■■□□ 2.32
PTCD1O75127 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PTCD1O75127 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
PTCD1O75127 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
PTCD1O75127 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC29.54■■■□□ 2.32
PTCD1O75127 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PTCD1O75127 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
PTCD1O75127 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
PTCD1O75127 HES6-206ENST00000409574 738 ntTSL 2 BASIC29.54■■■□□ 2.32
PTCD1O75127 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
PTCD1O75127 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
PTCD1O75127 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC29.54■■■□□ 2.32
PTCD1O75127 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PTCD1O75127 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PTCD1O75127 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
PTCD1O75127 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
PTCD1O75127 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
PTCD1O75127 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
PTCD1O75127 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
PTCD1O75127 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
PTCD1O75127 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC29.52■■■□□ 2.32
PTCD1O75127 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
PTCD1O75127 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
PTCD1O75127 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
PTCD1O75127 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
PTCD1O75127 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
PTCD1O75127 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
PTCD1O75127 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
PTCD1O75127 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
PTCD1O75127 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC29.51■■■□□ 2.31
PTCD1O75127 PARL-206ENST00000435888 1098 ntTSL 5 BASIC29.51■■■□□ 2.31
PTCD1O75127 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms