Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CTNND1O60716 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CTNND1O60716 RASA4CP-201ENST00000424092 1398 ntBASIC26.96■■□□□ 1.91
CTNND1O60716 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.91
CTNND1O60716 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.95■■□□□ 1.91
CTNND1O60716 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
CTNND1O60716 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
CTNND1O60716 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.94■■□□□ 1.9
CTNND1O60716 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
CTNND1O60716 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.94■■□□□ 1.9
CTNND1O60716 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.94■■□□□ 1.9
CTNND1O60716 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.94■■□□□ 1.9
CTNND1O60716 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CTNND1O60716 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
CTNND1O60716 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.93■■□□□ 1.9
CTNND1O60716 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.93■■□□□ 1.9
CTNND1O60716 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
CTNND1O60716 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CTNND1O60716 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.93■■□□□ 1.9
CTNND1O60716 CA15P2-201ENST00000611168 834 ntBASIC26.93■■□□□ 1.9
CTNND1O60716 C17orf82-201ENST00000623772 1530 ntBASIC26.93■■□□□ 1.9
CTNND1O60716 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CTNND1O60716 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
CTNND1O60716 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CTNND1O60716 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.91■■□□□ 1.9
CTNND1O60716 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.91■■□□□ 1.9
CTNND1O60716 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.91■■□□□ 1.9
CTNND1O60716 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CTNND1O60716 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
CTNND1O60716 AC241377.3-202ENST00000626088 1088 ntBASIC26.91■■□□□ 1.9
CTNND1O60716 AC241585.3-202ENST00000628937 1088 ntBASIC26.91■■□□□ 1.9
CTNND1O60716 AC245100.8-202ENST00000629247 1058 ntBASIC26.91■■□□□ 1.9
CTNND1O60716 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CTNND1O60716 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CTNND1O60716 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CTNND1O60716 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CTNND1O60716 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CTNND1O60716 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.9■■□□□ 1.9
CTNND1O60716 AC027682.1-201ENST00000562846 899 ntBASIC26.9■■□□□ 1.9
CTNND1O60716 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
CTNND1O60716 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CTNND1O60716 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
CTNND1O60716 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CTNND1O60716 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CTNND1O60716 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.89■■□□□ 1.9
CTNND1O60716 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.89■■□□□ 1.9
CTNND1O60716 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.89■■□□□ 1.9
CTNND1O60716 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CTNND1O60716 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CTNND1O60716 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CTNND1O60716 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CTNND1O60716 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.88■■□□□ 1.89
CTNND1O60716 MIR6821-201ENST00000617625 74 ntBASIC26.88■■□□□ 1.89
CTNND1O60716 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CTNND1O60716 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CTNND1O60716 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CTNND1O60716 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CTNND1O60716 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
CTNND1O60716 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CTNND1O60716 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.87■■□□□ 1.89
CTNND1O60716 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.87■■□□□ 1.89
CTNND1O60716 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
CTNND1O60716 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.87■■□□□ 1.89
CTNND1O60716 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.87■■□□□ 1.89
CTNND1O60716 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CTNND1O60716 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
CTNND1O60716 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CTNND1O60716 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CTNND1O60716 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CTNND1O60716 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CTNND1O60716 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CTNND1O60716 AC104564.3-201ENST00000582367 638 ntBASIC26.86■■□□□ 1.89
CTNND1O60716 AC008764.7-201ENST00000593779 1081 ntBASIC26.86■■□□□ 1.89
CTNND1O60716 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CTNND1O60716 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CTNND1O60716 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
CTNND1O60716 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CTNND1O60716 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CTNND1O60716 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CTNND1O60716 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.85■■□□□ 1.89
CTNND1O60716 AC091060.1-201ENST00000623524 1766 ntBASIC26.85■■□□□ 1.89
CTNND1O60716 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CTNND1O60716 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
CTNND1O60716 AC097381.1-201ENST00000429019 1296 ntBASIC26.85■■□□□ 1.89
CTNND1O60716 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.85■■□□□ 1.89
CTNND1O60716 AC145676.1-201ENST00000514988 2004 ntBASIC26.85■■□□□ 1.89
CTNND1O60716 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CTNND1O60716 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
CTNND1O60716 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.84■■□□□ 1.89
CTNND1O60716 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.84■■□□□ 1.89
CTNND1O60716 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.84■■□□□ 1.89
CTNND1O60716 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.84■■□□□ 1.89
CTNND1O60716 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.84■■□□□ 1.89
CTNND1O60716 AC136469.2-201ENST00000623944 1028 ntBASIC26.84■■□□□ 1.89
CTNND1O60716 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
CTNND1O60716 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
CTNND1O60716 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.84■■□□□ 1.89
CTNND1O60716 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CTNND1O60716 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.84■■□□□ 1.89
CTNND1O60716 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms