Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
TSPAN3O60637 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TSPAN3O60637 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TSPAN3O60637 AL136116.3-201ENST00000402907 1138 ntBASIC23.66■■□□□ 1.38
TSPAN3O60637 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
TSPAN3O60637 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TSPAN3O60637 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TSPAN3O60637 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TSPAN3O60637 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TSPAN3O60637 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TSPAN3O60637 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TSPAN3O60637 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TSPAN3O60637 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.65■■□□□ 1.38
TSPAN3O60637 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
TSPAN3O60637 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.65■■□□□ 1.38
TSPAN3O60637 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
TSPAN3O60637 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TSPAN3O60637 AC005703.6-201ENST00000623265 1329 ntBASIC23.64■■□□□ 1.38
TSPAN3O60637 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TSPAN3O60637 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TSPAN3O60637 AL512631.2-201ENST00000604634 923 ntBASIC23.64■■□□□ 1.37
TSPAN3O60637 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.64■■□□□ 1.37
TSPAN3O60637 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TSPAN3O60637 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
TSPAN3O60637 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TSPAN3O60637 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TSPAN3O60637 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.63■■□□□ 1.37
TSPAN3O60637 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TSPAN3O60637 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.63■■□□□ 1.37
TSPAN3O60637 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TSPAN3O60637 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.63■■□□□ 1.37
TSPAN3O60637 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.63■■□□□ 1.37
TSPAN3O60637 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.62■■□□□ 1.37
TSPAN3O60637 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.62■■□□□ 1.37
TSPAN3O60637 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TSPAN3O60637 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.62■■□□□ 1.37
TSPAN3O60637 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TSPAN3O60637 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TSPAN3O60637 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.62■■□□□ 1.37
TSPAN3O60637 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TSPAN3O60637 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TSPAN3O60637 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TSPAN3O60637 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.61■■□□□ 1.37
TSPAN3O60637 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
TSPAN3O60637 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
TSPAN3O60637 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.6■■□□□ 1.37
TSPAN3O60637 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
TSPAN3O60637 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TSPAN3O60637 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TSPAN3O60637 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TSPAN3O60637 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TSPAN3O60637 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
TSPAN3O60637 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
TSPAN3O60637 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.58■■□□□ 1.37
TSPAN3O60637 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.58■■□□□ 1.37
TSPAN3O60637 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
TSPAN3O60637 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TSPAN3O60637 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.58■■□□□ 1.37
TSPAN3O60637 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TSPAN3O60637 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TSPAN3O60637 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TSPAN3O60637 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
TSPAN3O60637 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.57■■□□□ 1.36
TSPAN3O60637 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.57■■□□□ 1.36
TSPAN3O60637 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.57■■□□□ 1.36
TSPAN3O60637 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TSPAN3O60637 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TSPAN3O60637 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
TSPAN3O60637 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TSPAN3O60637 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
TSPAN3O60637 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
TSPAN3O60637 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TSPAN3O60637 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.56■■□□□ 1.36
TSPAN3O60637 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.56■■□□□ 1.36
TSPAN3O60637 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TSPAN3O60637 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TSPAN3O60637 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.56■■□□□ 1.36
TSPAN3O60637 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.56■■□□□ 1.36
TSPAN3O60637 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TSPAN3O60637 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TSPAN3O60637 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TSPAN3O60637 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
TSPAN3O60637 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
TSPAN3O60637 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TSPAN3O60637 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TSPAN3O60637 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
TSPAN3O60637 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
TSPAN3O60637 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
TSPAN3O60637 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
TSPAN3O60637 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TSPAN3O60637 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TSPAN3O60637 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
TSPAN3O60637 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.54■■□□□ 1.36
TSPAN3O60637 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
TSPAN3O60637 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.54■■□□□ 1.36
TSPAN3O60637 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TSPAN3O60637 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TSPAN3O60637 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TSPAN3O60637 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TSPAN3O60637 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms