Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PCDH7O60245 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDH7O60245 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH7O60245 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDH7O60245 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDH7O60245 MIR4508-201ENST00000584178 70 ntBASIC21.84■■□□□ 1.09
PCDH7O60245 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH7O60245 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
PCDH7O60245 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDH7O60245 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH7O60245 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH7O60245 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH7O60245 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PCDH7O60245 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.83■■□□□ 1.09
PCDH7O60245 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH7O60245 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDH7O60245 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDH7O60245 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
PCDH7O60245 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH7O60245 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH7O60245 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH7O60245 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH7O60245 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDH7O60245 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH7O60245 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH7O60245 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH7O60245 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH7O60245 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDH7O60245 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDH7O60245 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDH7O60245 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH7O60245 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH7O60245 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PCDH7O60245 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDH7O60245 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH7O60245 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH7O60245 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH7O60245 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDH7O60245 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH7O60245 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH7O60245 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDH7O60245 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH7O60245 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH7O60245 KRT8P33-201ENST00000508125 1423 ntBASIC21.8■■□□□ 1.08
PCDH7O60245 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDH7O60245 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDH7O60245 AF131216.4-201ENST00000638924 1588 ntBASIC21.8■■□□□ 1.08
PCDH7O60245 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PCDH7O60245 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDH7O60245 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDH7O60245 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDH7O60245 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH7O60245 DUSP8P5-201ENST00000422884 1815 ntBASIC21.8■■□□□ 1.08
PCDH7O60245 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH7O60245 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDH7O60245 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH7O60245 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH7O60245 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH7O60245 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDH7O60245 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH7O60245 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PCDH7O60245 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH7O60245 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH7O60245 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH7O60245 AC103834.1-201ENST00000520383 144 ntBASIC21.79■■□□□ 1.08
PCDH7O60245 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDH7O60245 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDH7O60245 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDH7O60245 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH7O60245 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH7O60245 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH7O60245 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH7O60245 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH7O60245 YBX1P4-201ENST00000392794 808 ntBASIC21.78■■□□□ 1.08
PCDH7O60245 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDH7O60245 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH7O60245 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDH7O60245 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PCDH7O60245 AC133561.1-201ENST00000568600 2415 ntBASIC21.78■■□□□ 1.08
PCDH7O60245 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH7O60245 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH7O60245 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PCDH7O60245 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH7O60245 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH7O60245 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH7O60245 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PCDH7O60245 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH7O60245 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PCDH7O60245 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH7O60245 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH7O60245 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH7O60245 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDH7O60245 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PCDH7O60245 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH7O60245 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
PCDH7O60245 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDH7O60245 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDH7O60245 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH7O60245 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH7O60245 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms