Protein–RNA interactions for Protein: O43759

SYNGR1, Synaptogyrin-1, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1O43759 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SYNGR1O43759 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNGR1O43759 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGR1O43759 YBX1P4-201ENST00000392794 808 ntBASIC19.45■□□□□ 0.7
SYNGR1O43759 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.45■□□□□ 0.7
SYNGR1O43759 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.45■□□□□ 0.7
SYNGR1O43759 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGR1O43759 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.45■□□□□ 0.7
SYNGR1O43759 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGR1O43759 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGR1O43759 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGR1O43759 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGR1O43759 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SYNGR1O43759 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNGR1O43759 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.44■□□□□ 0.7
SYNGR1O43759 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYNGR1O43759 AC103724.3-201ENST00000564481 992 ntBASIC19.44■□□□□ 0.7
SYNGR1O43759 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.44■□□□□ 0.7
SYNGR1O43759 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYNGR1O43759 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SYNGR1O43759 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGR1O43759 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.43■□□□□ 0.7
SYNGR1O43759 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.43■□□□□ 0.7
SYNGR1O43759 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.43■□□□□ 0.7
SYNGR1O43759 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNGR1O43759 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.43■□□□□ 0.7
SYNGR1O43759 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SYNGR1O43759 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SYNGR1O43759 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGR1O43759 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNGR1O43759 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SYNGR1O43759 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.42■□□□□ 0.7
SYNGR1O43759 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGR1O43759 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SYNGR1O43759 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGR1O43759 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.42■□□□□ 0.7
SYNGR1O43759 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGR1O43759 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.42■□□□□ 0.7
SYNGR1O43759 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.42■□□□□ 0.7
SYNGR1O43759 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.42■□□□□ 0.7
SYNGR1O43759 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGR1O43759 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.42■□□□□ 0.7
SYNGR1O43759 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.42■□□□□ 0.7
SYNGR1O43759 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGR1O43759 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SYNGR1O43759 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGR1O43759 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNGR1O43759 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYNGR1O43759 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.41■□□□□ 0.7
SYNGR1O43759 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNGR1O43759 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNGR1O43759 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNGR1O43759 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNGR1O43759 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNGR1O43759 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.4■□□□□ 0.7
SYNGR1O43759 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNGR1O43759 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SYNGR1O43759 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.4■□□□□ 0.7
SYNGR1O43759 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.4■□□□□ 0.7
SYNGR1O43759 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNGR1O43759 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNGR1O43759 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNGR1O43759 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNGR1O43759 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNGR1O43759 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.39■□□□□ 0.7
SYNGR1O43759 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SYNGR1O43759 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
SYNGR1O43759 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.39■□□□□ 0.69
SYNGR1O43759 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SYNGR1O43759 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNGR1O43759 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SYNGR1O43759 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNGR1O43759 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SYNGR1O43759 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNGR1O43759 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.38■□□□□ 0.69
SYNGR1O43759 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNGR1O43759 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SYNGR1O43759 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.38■□□□□ 0.69
SYNGR1O43759 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SYNGR1O43759 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGR1O43759 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGR1O43759 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGR1O43759 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGR1O43759 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGR1O43759 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SYNGR1O43759 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGR1O43759 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.37■□□□□ 0.69
SYNGR1O43759 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGR1O43759 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGR1O43759 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.36■□□□□ 0.69
SYNGR1O43759 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGR1O43759 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SYNGR1O43759 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SYNGR1O43759 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SYNGR1O43759 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.36■□□□□ 0.69
SYNGR1O43759 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGR1O43759 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGR1O43759 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.36■□□□□ 0.69
SYNGR1O43759 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGR1O43759 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms