Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
PPM1DO15297 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PPM1DO15297 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
PPM1DO15297 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.16
PPM1DO15297 AC005703.6-201ENST00000623265 1329 ntBASIC22.32■■□□□ 1.16
PPM1DO15297 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PPM1DO15297 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PPM1DO15297 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PPM1DO15297 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PPM1DO15297 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.32■■□□□ 1.16
PPM1DO15297 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.32■■□□□ 1.16
PPM1DO15297 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.32■■□□□ 1.16
PPM1DO15297 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.32■■□□□ 1.16
PPM1DO15297 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PPM1DO15297 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PPM1DO15297 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PPM1DO15297 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.31■■□□□ 1.16
PPM1DO15297 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPM1DO15297 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPM1DO15297 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPM1DO15297 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPM1DO15297 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.31■■□□□ 1.16
PPM1DO15297 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.31■■□□□ 1.16
PPM1DO15297 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PPM1DO15297 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPM1DO15297 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.31■■□□□ 1.16
PPM1DO15297 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.31■■□□□ 1.16
PPM1DO15297 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.31■■□□□ 1.16
PPM1DO15297 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.31■■□□□ 1.16
PPM1DO15297 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPM1DO15297 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.3■■□□□ 1.16
PPM1DO15297 AL022069.1-201ENST00000568025 1636 ntBASIC22.3■■□□□ 1.16
PPM1DO15297 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PPM1DO15297 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.3■■□□□ 1.16
PPM1DO15297 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PPM1DO15297 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.29■■□□□ 1.16
PPM1DO15297 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PPM1DO15297 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PPM1DO15297 AC135731.1-201ENST00000569415 2548 ntBASIC22.29■■□□□ 1.16
PPM1DO15297 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.29■■□□□ 1.16
PPM1DO15297 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PPM1DO15297 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PPM1DO15297 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PPM1DO15297 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PPM1DO15297 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PPM1DO15297 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPM1DO15297 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.28■■□□□ 1.16
PPM1DO15297 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
PPM1DO15297 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPM1DO15297 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPM1DO15297 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPM1DO15297 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
PPM1DO15297 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PPM1DO15297 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PPM1DO15297 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PPM1DO15297 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.27■■□□□ 1.16
PPM1DO15297 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.27■■□□□ 1.16
PPM1DO15297 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.27■■□□□ 1.16
PPM1DO15297 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
PPM1DO15297 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PPM1DO15297 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.27■■□□□ 1.16
PPM1DO15297 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.27■■□□□ 1.16
PPM1DO15297 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PPM1DO15297 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
PPM1DO15297 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.26■■□□□ 1.15
PPM1DO15297 HLA-L-211ENST00000482052 1765 ntBASIC22.26■■□□□ 1.15
PPM1DO15297 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.26■■□□□ 1.15
PPM1DO15297 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PPM1DO15297 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PPM1DO15297 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PPM1DO15297 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PPM1DO15297 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PPM1DO15297 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
PPM1DO15297 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PPM1DO15297 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PPM1DO15297 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PPM1DO15297 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PPM1DO15297 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PPM1DO15297 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PPM1DO15297 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PPM1DO15297 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PPM1DO15297 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.25■■□□□ 1.15
PPM1DO15297 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PPM1DO15297 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PPM1DO15297 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PPM1DO15297 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PPM1DO15297 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
PPM1DO15297 SRD5A1P1-201ENST00000442297 786 ntBASIC22.24■■□□□ 1.15
PPM1DO15297 AC005837.3-201ENST00000612163 286 ntBASIC22.24■■□□□ 1.15
PPM1DO15297 AP003733.4-201ENST00000623785 1697 ntBASIC22.23■■□□□ 1.15
PPM1DO15297 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.23■■□□□ 1.15
PPM1DO15297 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.23■■□□□ 1.15
PPM1DO15297 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PPM1DO15297 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PPM1DO15297 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.23■■□□□ 1.15
PPM1DO15297 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PPM1DO15297 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PPM1DO15297 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.23■■□□□ 1.15
PPM1DO15297 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PPM1DO15297 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms