Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC37.95■■■■□ 3.67
CHD1O14646 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC37.95■■■■□ 3.67
CHD1O14646 IGHV3-19-201ENST00000521488 291 ntBASIC37.95■■■■□ 3.67
CHD1O14646 MIR3181-201ENST00000578512 73 ntBASIC37.95■■■■□ 3.67
CHD1O14646 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
CHD1O14646 REST-206ENST00000612429 1376 ntTSL 5 BASIC37.95■■■■□ 3.67
CHD1O14646 REST-207ENST00000616975 1370 ntTSL 5 BASIC37.95■■■■□ 3.67
CHD1O14646 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC37.95■■■■□ 3.67
CHD1O14646 KRT18P61-201ENST00000585825 1298 ntBASIC37.95■■■■□ 3.67
CHD1O14646 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC37.94■■■■□ 3.66
CHD1O14646 AC009086.3-201ENST00000623486 1008 ntBASIC37.94■■■■□ 3.66
CHD1O14646 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC37.93■■■■□ 3.66
CHD1O14646 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC37.93■■■■□ 3.66
CHD1O14646 MIR572-201ENST00000384983 95 ntBASIC37.92■■■■□ 3.66
CHD1O14646 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC37.92■■■■□ 3.66
CHD1O14646 AL354811.1-201ENST00000610286 706 ntBASIC37.92■■■■□ 3.66
CHD1O14646 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC37.92■■■■□ 3.66
CHD1O14646 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC37.92■■■■□ 3.66
CHD1O14646 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC37.92■■■■□ 3.66
CHD1O14646 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC37.92■■■■□ 3.66
CHD1O14646 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC37.92■■■■□ 3.66
CHD1O14646 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC37.91■■■■□ 3.66
CHD1O14646 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
CHD1O14646 AL355802.2-201ENST00000402069 882 ntBASIC37.91■■■■□ 3.66
CHD1O14646 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC37.91■■■■□ 3.66
CHD1O14646 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC37.91■■■■□ 3.66
CHD1O14646 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC37.9■■■■□ 3.66
CHD1O14646 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
CHD1O14646 NTF6G-201ENST00000591094 616 ntBASIC37.9■■■■□ 3.66
CHD1O14646 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
CHD1O14646 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC37.9■■■■□ 3.66
CHD1O14646 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC37.89■■■■□ 3.66
CHD1O14646 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC37.88■■■■□ 3.65
CHD1O14646 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC37.88■■■■□ 3.65
CHD1O14646 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC37.88■■■■□ 3.65
CHD1O14646 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC37.88■■■■□ 3.65
CHD1O14646 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC37.88■■■■□ 3.65
CHD1O14646 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC37.88■■■■□ 3.65
CHD1O14646 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC37.88■■■■□ 3.65
CHD1O14646 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC37.88■■■■□ 3.65
CHD1O14646 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC37.87■■■■□ 3.65
CHD1O14646 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
CHD1O14646 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
CHD1O14646 AC006015.1-201ENST00000429970 570 ntBASIC37.87■■■■□ 3.65
CHD1O14646 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC37.86■■■■□ 3.65
CHD1O14646 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC37.86■■■■□ 3.65
CHD1O14646 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC37.86■■■■□ 3.65
CHD1O14646 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC37.86■■■■□ 3.65
CHD1O14646 CDCA4P2-201ENST00000441182 718 ntBASIC37.86■■■■□ 3.65
CHD1O14646 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC37.86■■■■□ 3.65
CHD1O14646 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC37.86■■■■□ 3.65
CHD1O14646 AC080038.1-201ENST00000611274 1154 ntBASIC37.86■■■■□ 3.65
CHD1O14646 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
CHD1O14646 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC37.85■■■■□ 3.65
CHD1O14646 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC37.85■■■■□ 3.65
CHD1O14646 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC37.85■■■■□ 3.65
CHD1O14646 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC37.84■■■■□ 3.65
CHD1O14646 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC37.84■■■■□ 3.65
CHD1O14646 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC37.84■■■■□ 3.65
CHD1O14646 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC37.84■■■■□ 3.65
CHD1O14646 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC37.84■■■■□ 3.65
CHD1O14646 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC37.84■■■■□ 3.65
CHD1O14646 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
CHD1O14646 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
CHD1O14646 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC37.83■■■■□ 3.65
CHD1O14646 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC37.83■■■■□ 3.65
CHD1O14646 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC37.83■■■■□ 3.65
CHD1O14646 NKILA-201ENST00000613231 537 ntTSL 4 BASIC37.83■■■■□ 3.65
CHD1O14646 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC37.82■■■■□ 3.65
CHD1O14646 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC37.82■■■■□ 3.65
CHD1O14646 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC37.82■■■■□ 3.65
CHD1O14646 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC37.82■■■■□ 3.65
CHD1O14646 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC37.82■■■■□ 3.65
CHD1O14646 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC37.82■■■■□ 3.64
CHD1O14646 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC37.82■■■■□ 3.64
CHD1O14646 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC37.82■■■■□ 3.64
CHD1O14646 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
CHD1O14646 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC37.81■■■■□ 3.64
CHD1O14646 TMEM191A-211ENST00000637163 1067 ntBASIC37.81■■■■□ 3.64
CHD1O14646 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC37.81■■■■□ 3.64
CHD1O14646 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
CHD1O14646 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC37.81■■■■□ 3.64
CHD1O14646 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC37.8■■■■□ 3.64
CHD1O14646 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC37.8■■■■□ 3.64
CHD1O14646 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC37.79■■■■□ 3.64
CHD1O14646 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC37.79■■■■□ 3.64
CHD1O14646 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC37.79■■■■□ 3.64
CHD1O14646 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC37.79■■■■□ 3.64
CHD1O14646 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC37.78■■■■□ 3.64
CHD1O14646 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC37.78■■■■□ 3.64
CHD1O14646 PPP1R14BP3-201ENST00000509033 445 ntBASIC37.78■■■■□ 3.64
CHD1O14646 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC37.78■■■■□ 3.64
CHD1O14646 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC37.78■■■■□ 3.64
CHD1O14646 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC37.77■■■■□ 3.64
CHD1O14646 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC37.77■■■■□ 3.64
CHD1O14646 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC37.77■■■■□ 3.64
CHD1O14646 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
CHD1O14646 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.64
CHD1O14646 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC37.76■■■■□ 3.64
CHD1O14646 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms