Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN4O14493 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CLDN4O14493 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLDN4O14493 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLDN4O14493 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLDN4O14493 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLDN4O14493 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.56■■□□□ 1.04
CLDN4O14493 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.56■■□□□ 1.04
CLDN4O14493 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLDN4O14493 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN4O14493 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN4O14493 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
CLDN4O14493 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.55■■□□□ 1.04
CLDN4O14493 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.55■■□□□ 1.04
CLDN4O14493 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN4O14493 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN4O14493 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN4O14493 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN4O14493 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN4O14493 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN4O14493 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
CLDN4O14493 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.54■■□□□ 1.04
CLDN4O14493 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CLDN4O14493 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN4O14493 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.53■■□□□ 1.04
CLDN4O14493 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN4O14493 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
CLDN4O14493 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN4O14493 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN4O14493 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.53■■□□□ 1.04
CLDN4O14493 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.53■■□□□ 1.04
CLDN4O14493 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.53■■□□□ 1.04
CLDN4O14493 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN4O14493 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.53■■□□□ 1.04
CLDN4O14493 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CLDN4O14493 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN4O14493 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN4O14493 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN4O14493 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
CLDN4O14493 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLDN4O14493 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.52■■□□□ 1.04
CLDN4O14493 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CLDN4O14493 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLDN4O14493 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLDN4O14493 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.52■■□□□ 1.04
CLDN4O14493 AL356441.2-201ENST00000443009 864 ntBASIC21.52■■□□□ 1.04
CLDN4O14493 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLDN4O14493 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN4O14493 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN4O14493 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN4O14493 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN4O14493 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN4O14493 MIR6724-1-201ENST00000616420 92 ntBASIC21.51■■□□□ 1.03
CLDN4O14493 MIR6724-2-201ENST00000616483 92 ntBASIC21.51■■□□□ 1.03
CLDN4O14493 MIR6724-4-201ENST00000617390 92 ntBASIC21.51■■□□□ 1.03
CLDN4O14493 MIR6724-3-201ENST00000622482 92 ntBASIC21.51■■□□□ 1.03
CLDN4O14493 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CLDN4O14493 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN4O14493 AC005703.6-201ENST00000623265 1329 ntBASIC21.51■■□□□ 1.03
CLDN4O14493 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CLDN4O14493 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CLDN4O14493 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CLDN4O14493 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN4O14493 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN4O14493 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN4O14493 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.5■■□□□ 1.03
CLDN4O14493 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.5■■□□□ 1.03
CLDN4O14493 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.5■■□□□ 1.03
CLDN4O14493 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CLDN4O14493 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN4O14493 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.5■■□□□ 1.03
CLDN4O14493 ALDH1A3-203ENST00000557963 1670 ntBASIC21.5■■□□□ 1.03
CLDN4O14493 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
CLDN4O14493 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.49■■□□□ 1.03
CLDN4O14493 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN4O14493 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN4O14493 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.49■■□□□ 1.03
CLDN4O14493 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN4O14493 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.49■■□□□ 1.03
CLDN4O14493 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN4O14493 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.49■■□□□ 1.03
CLDN4O14493 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CLDN4O14493 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN4O14493 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CLDN4O14493 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.48■■□□□ 1.03
CLDN4O14493 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.48■■□□□ 1.03
CLDN4O14493 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN4O14493 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.48■■□□□ 1.03
CLDN4O14493 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.48■■□□□ 1.03
CLDN4O14493 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.48■■□□□ 1.03
CLDN4O14493 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CLDN4O14493 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN4O14493 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN4O14493 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CLDN4O14493 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.47■■□□□ 1.03
CLDN4O14493 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CLDN4O14493 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.47■■□□□ 1.03
CLDN4O14493 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CLDN4O14493 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN4O14493 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms