Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.56■□□□□ 0.4
NDUFA4O00483 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFA4O00483 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFA4O00483 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFA4O00483 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFA4O00483 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFA4O00483 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
NDUFA4O00483 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFA4O00483 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.55■□□□□ 0.4
NDUFA4O00483 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NDUFA4O00483 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.55■□□□□ 0.4
NDUFA4O00483 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.55■□□□□ 0.4
NDUFA4O00483 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NDUFA4O00483 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NDUFA4O00483 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NDUFA4O00483 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFA4O00483 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFA4O00483 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFA4O00483 AC021242.3-201ENST00000607598 1377 ntBASIC17.54■□□□□ 0.4
NDUFA4O00483 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFA4O00483 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFA4O00483 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFA4O00483 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFA4O00483 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.54■□□□□ 0.4
NDUFA4O00483 Z92544.1-202ENST00000571933 1220 ntBASIC17.54■□□□□ 0.4
NDUFA4O00483 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.54■□□□□ 0.4
NDUFA4O00483 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.53■□□□□ 0.4
NDUFA4O00483 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.53■□□□□ 0.4
NDUFA4O00483 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA4O00483 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.53■□□□□ 0.4
NDUFA4O00483 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA4O00483 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA4O00483 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA4O00483 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.53■□□□□ 0.4
NDUFA4O00483 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA4O00483 KRT125P-201ENST00000546827 989 ntBASIC17.53■□□□□ 0.4
NDUFA4O00483 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.53■□□□□ 0.4
NDUFA4O00483 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.53■□□□□ 0.4
NDUFA4O00483 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA4O00483 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA4O00483 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFA4O00483 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.52■□□□□ 0.4
NDUFA4O00483 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFA4O00483 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFA4O00483 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFA4O00483 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFA4O00483 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFA4O00483 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFA4O00483 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.52■□□□□ 0.4
NDUFA4O00483 SNX5-217ENST00000606557 1087 ntBASIC17.52■□□□□ 0.4
NDUFA4O00483 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NDUFA4O00483 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFA4O00483 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFA4O00483 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NDUFA4O00483 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
NDUFA4O00483 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NDUFA4O00483 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NDUFA4O00483 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
NDUFA4O00483 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFA4O00483 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.51■□□□□ 0.39
NDUFA4O00483 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NDUFA4O00483 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFA4O00483 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFA4O00483 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.51■□□□□ 0.39
NDUFA4O00483 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.51■□□□□ 0.39
NDUFA4O00483 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.51■□□□□ 0.39
NDUFA4O00483 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFA4O00483 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFA4O00483 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.51■□□□□ 0.39
NDUFA4O00483 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.51■□□□□ 0.39
NDUFA4O00483 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.5■□□□□ 0.39
NDUFA4O00483 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.5■□□□□ 0.39
NDUFA4O00483 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFA4O00483 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
NDUFA4O00483 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFA4O00483 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFA4O00483 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NDUFA4O00483 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NDUFA4O00483 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NDUFA4O00483 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFA4O00483 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFA4O00483 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFA4O00483 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NDUFA4O00483 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFA4O00483 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NDUFA4O00483 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFA4O00483 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.49■□□□□ 0.39
NDUFA4O00483 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.49■□□□□ 0.39
NDUFA4O00483 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.49■□□□□ 0.39
NDUFA4O00483 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.49■□□□□ 0.39
NDUFA4O00483 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.49■□□□□ 0.39
NDUFA4O00483 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NDUFA4O00483 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.49■□□□□ 0.39
NDUFA4O00483 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.48■□□□□ 0.39
NDUFA4O00483 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NDUFA4O00483 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA4O00483 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NDUFA4O00483 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA4O00483 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA4O00483 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms