Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
FOXE1O00358 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
FOXE1O00358 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.89■■□□□ 1.09
FOXE1O00358 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXE1O00358 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXE1O00358 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.88■■□□□ 1.09
FOXE1O00358 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXE1O00358 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXE1O00358 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
FOXE1O00358 AC137630.3-201ENST00000607245 391 ntBASIC21.88■■□□□ 1.09
FOXE1O00358 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
FOXE1O00358 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXE1O00358 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXE1O00358 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.88■■□□□ 1.09
FOXE1O00358 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXE1O00358 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXE1O00358 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FOXE1O00358 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FOXE1O00358 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXE1O00358 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXE1O00358 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FOXE1O00358 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXE1O00358 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.87■■□□□ 1.09
FOXE1O00358 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FOXE1O00358 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXE1O00358 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXE1O00358 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXE1O00358 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
FOXE1O00358 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
FOXE1O00358 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FOXE1O00358 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.86■■□□□ 1.09
FOXE1O00358 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXE1O00358 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXE1O00358 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
FOXE1O00358 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXE1O00358 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXE1O00358 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FOXE1O00358 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.85■■□□□ 1.09
FOXE1O00358 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXE1O00358 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXE1O00358 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
FOXE1O00358 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.85■■□□□ 1.09
FOXE1O00358 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
FOXE1O00358 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
FOXE1O00358 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXE1O00358 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.84■■□□□ 1.09
FOXE1O00358 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
FOXE1O00358 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.84■■□□□ 1.09
FOXE1O00358 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXE1O00358 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXE1O00358 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
FOXE1O00358 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
FOXE1O00358 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
FOXE1O00358 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.83■■□□□ 1.09
FOXE1O00358 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.83■■□□□ 1.09
FOXE1O00358 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.83■■□□□ 1.09
FOXE1O00358 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXE1O00358 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXE1O00358 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.82■■□□□ 1.08
FOXE1O00358 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXE1O00358 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXE1O00358 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
FOXE1O00358 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FOXE1O00358 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXE1O00358 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXE1O00358 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.81■■□□□ 1.08
FOXE1O00358 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.81■■□□□ 1.08
FOXE1O00358 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
FOXE1O00358 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.81■■□□□ 1.08
FOXE1O00358 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.81■■□□□ 1.08
FOXE1O00358 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FOXE1O00358 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXE1O00358 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
FOXE1O00358 DUSP8P5-201ENST00000422884 1815 ntBASIC21.8■■□□□ 1.08
FOXE1O00358 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.8■■□□□ 1.08
FOXE1O00358 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FOXE1O00358 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXE1O00358 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXE1O00358 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
FOXE1O00358 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
FOXE1O00358 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXE1O00358 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXE1O00358 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXE1O00358 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXE1O00358 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXE1O00358 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXE1O00358 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.79■■□□□ 1.08
FOXE1O00358 SNX5-217ENST00000606557 1087 ntBASIC21.79■■□□□ 1.08
FOXE1O00358 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.79■■□□□ 1.08
FOXE1O00358 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXE1O00358 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXE1O00358 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXE1O00358 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.78■■□□□ 1.08
FOXE1O00358 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.78■■□□□ 1.08
FOXE1O00358 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXE1O00358 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXE1O00358 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXE1O00358 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXE1O00358 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.78■■□□□ 1.08
FOXE1O00358 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms