Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC28A1O00337 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC28A1O00337 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC28A1O00337 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC28A1O00337 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
SLC28A1O00337 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC28A1O00337 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC28A1O00337 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
SLC28A1O00337 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
SLC28A1O00337 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SLC28A1O00337 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.01■■□□□ 1.11
SLC28A1O00337 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.01■■□□□ 1.11
SLC28A1O00337 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC28A1O00337 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.01■■□□□ 1.11
SLC28A1O00337 DUX4L18-201ENST00000553347 1267 ntBASIC22.01■■□□□ 1.11
SLC28A1O00337 NTF6A-201ENST00000591175 560 ntBASIC22.01■■□□□ 1.11
SLC28A1O00337 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC28A1O00337 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC28A1O00337 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC28A1O00337 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC28A1O00337 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLC28A1O00337 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC28A1O00337 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC28A1O00337 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
SLC28A1O00337 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC28A1O00337 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22■■□□□ 1.11
SLC28A1O00337 ANOS2P-203ENST00000472227 1816 ntBASIC22■■□□□ 1.11
SLC28A1O00337 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22■■□□□ 1.11
SLC28A1O00337 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22■■□□□ 1.11
SLC28A1O00337 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22■■□□□ 1.11
SLC28A1O00337 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SLC28A1O00337 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SLC28A1O00337 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC28A1O00337 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SLC28A1O00337 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC28A1O00337 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.99■■□□□ 1.11
SLC28A1O00337 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.99■■□□□ 1.11
SLC28A1O00337 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLC28A1O00337 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC28A1O00337 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.99■■□□□ 1.11
SLC28A1O00337 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC28A1O00337 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.99■■□□□ 1.11
SLC28A1O00337 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.98■■□□□ 1.11
SLC28A1O00337 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.98■■□□□ 1.11
SLC28A1O00337 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC28A1O00337 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC28A1O00337 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC28A1O00337 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
SLC28A1O00337 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC28A1O00337 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC28A1O00337 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.97■■□□□ 1.11
SLC28A1O00337 AC131274.2-201ENST00000580697 1507 ntBASIC21.96■■□□□ 1.11
SLC28A1O00337 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLC28A1O00337 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.96■■□□□ 1.11
SLC28A1O00337 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC28A1O00337 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.96■■□□□ 1.11
SLC28A1O00337 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC28A1O00337 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
SLC28A1O00337 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SLC28A1O00337 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC28A1O00337 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC28A1O00337 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SLC28A1O00337 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC28A1O00337 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SLC28A1O00337 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC28A1O00337 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SLC28A1O00337 BHLHE23-202ENST00000612929 1109 ntBASIC21.95■■□□□ 1.1
SLC28A1O00337 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SLC28A1O00337 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC28A1O00337 AC092068.2-201ENST00000590491 1708 ntBASIC21.94■■□□□ 1.1
SLC28A1O00337 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC28A1O00337 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
SLC28A1O00337 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SLC28A1O00337 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SLC28A1O00337 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC28A1O00337 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.94■■□□□ 1.1
SLC28A1O00337 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC28A1O00337 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC28A1O00337 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SLC28A1O00337 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC28A1O00337 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC28A1O00337 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC28A1O00337 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC28A1O00337 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC28A1O00337 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SLC28A1O00337 ALDH1A3-203ENST00000557963 1670 ntBASIC21.93■■□□□ 1.1
SLC28A1O00337 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.93■■□□□ 1.1
SLC28A1O00337 AC074183.2-201ENST00000623112 922 ntBASIC21.93■■□□□ 1.1
SLC28A1O00337 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC28A1O00337 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC28A1O00337 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC28A1O00337 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC28A1O00337 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SLC28A1O00337 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SLC28A1O00337 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC28A1O00337 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.92■■□□□ 1.1
SLC28A1O00337 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC28A1O00337 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SLC28A1O00337 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.92■■□□□ 1.1
SLC28A1O00337 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms