Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.69■□□□□ 0.26
SMKR1H3BMG3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SMKR1H3BMG3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMKR1H3BMG3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
SMKR1H3BMG3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMKR1H3BMG3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.68■□□□□ 0.26
SMKR1H3BMG3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMKR1H3BMG3 AC007375.3-201ENST00000600936 2314 ntBASIC16.68■□□□□ 0.26
SMKR1H3BMG3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMKR1H3BMG3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMKR1H3BMG3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMKR1H3BMG3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMKR1H3BMG3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMKR1H3BMG3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SMKR1H3BMG3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC16.68■□□□□ 0.26
SMKR1H3BMG3 AC126177.7-201ENST00000547904 679 ntBASIC16.68■□□□□ 0.26
SMKR1H3BMG3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.68■□□□□ 0.26
SMKR1H3BMG3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMKR1H3BMG3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.68■□□□□ 0.26
SMKR1H3BMG3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMKR1H3BMG3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SMKR1H3BMG3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SMKR1H3BMG3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.67■□□□□ 0.26
SMKR1H3BMG3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMKR1H3BMG3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMKR1H3BMG3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMKR1H3BMG3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMKR1H3BMG3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMKR1H3BMG3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMKR1H3BMG3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
SMKR1H3BMG3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMKR1H3BMG3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMKR1H3BMG3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC16.67■□□□□ 0.26
SMKR1H3BMG3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC16.67■□□□□ 0.26
SMKR1H3BMG3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.67■□□□□ 0.26
SMKR1H3BMG3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMKR1H3BMG3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.67■□□□□ 0.26
SMKR1H3BMG3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMKR1H3BMG3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMKR1H3BMG3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMKR1H3BMG3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMKR1H3BMG3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMKR1H3BMG3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMKR1H3BMG3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMKR1H3BMG3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMKR1H3BMG3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.66■□□□□ 0.26
SMKR1H3BMG3 HES6-205ENST00000409356 528 ntTSL 2 BASIC16.66■□□□□ 0.26
SMKR1H3BMG3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMKR1H3BMG3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMKR1H3BMG3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMKR1H3BMG3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.66■□□□□ 0.26
SMKR1H3BMG3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMKR1H3BMG3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMKR1H3BMG3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SMKR1H3BMG3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMKR1H3BMG3 DUSP8P3-201ENST00000399571 1760 ntBASIC16.64■□□□□ 0.25
SMKR1H3BMG3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.64■□□□□ 0.25
SMKR1H3BMG3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMKR1H3BMG3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SMKR1H3BMG3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.64■□□□□ 0.25
SMKR1H3BMG3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMKR1H3BMG3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SMKR1H3BMG3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.64■□□□□ 0.25
SMKR1H3BMG3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMKR1H3BMG3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMKR1H3BMG3 DUX4L11-201ENST00000611504 1267 ntBASIC16.64■□□□□ 0.25
SMKR1H3BMG3 DUX4L12-201ENST00000614593 1267 ntBASIC16.64■□□□□ 0.25
SMKR1H3BMG3 DUX4L14-201ENST00000621227 1267 ntBASIC16.64■□□□□ 0.25
SMKR1H3BMG3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.64■□□□□ 0.25
SMKR1H3BMG3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMKR1H3BMG3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMKR1H3BMG3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMKR1H3BMG3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SMKR1H3BMG3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMKR1H3BMG3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMKR1H3BMG3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMKR1H3BMG3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMKR1H3BMG3 AL024507.2-201ENST00000606070 2574 ntBASIC16.63■□□□□ 0.25
SMKR1H3BMG3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMKR1H3BMG3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.63■□□□□ 0.25
SMKR1H3BMG3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC16.63■□□□□ 0.25
SMKR1H3BMG3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SMKR1H3BMG3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms