Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPIPA2E9PIF3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
NPIPA2E9PIF3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPIPA2E9PIF3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPIPA2E9PIF3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPIPA2E9PIF3 AC096631.2-201ENST00000436136 790 ntBASIC20.82■□□□□ 0.92
NPIPA2E9PIF3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.82■□□□□ 0.92
NPIPA2E9PIF3 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.82■□□□□ 0.92
NPIPA2E9PIF3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPIPA2E9PIF3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.82■□□□□ 0.92
NPIPA2E9PIF3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.81■□□□□ 0.92
NPIPA2E9PIF3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.81■□□□□ 0.92
NPIPA2E9PIF3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NPIPA2E9PIF3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.81■□□□□ 0.92
NPIPA2E9PIF3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.81■□□□□ 0.92
NPIPA2E9PIF3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
NPIPA2E9PIF3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPIPA2E9PIF3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPIPA2E9PIF3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPIPA2E9PIF3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPIPA2E9PIF3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPIPA2E9PIF3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPIPA2E9PIF3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.8■□□□□ 0.92
NPIPA2E9PIF3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPIPA2E9PIF3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
NPIPA2E9PIF3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.8■□□□□ 0.92
NPIPA2E9PIF3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPIPA2E9PIF3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.8■□□□□ 0.92
NPIPA2E9PIF3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NPIPA2E9PIF3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPIPA2E9PIF3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPIPA2E9PIF3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPIPA2E9PIF3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPIPA2E9PIF3 AC004448.1-201ENST00000458332 883 ntBASIC20.79■□□□□ 0.92
NPIPA2E9PIF3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPIPA2E9PIF3 AC110285.6-201ENST00000617652 491 ntBASIC20.79■□□□□ 0.92
NPIPA2E9PIF3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPIPA2E9PIF3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.78■□□□□ 0.92
NPIPA2E9PIF3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPIPA2E9PIF3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPIPA2E9PIF3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NPIPA2E9PIF3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPIPA2E9PIF3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.78■□□□□ 0.92
NPIPA2E9PIF3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.78■□□□□ 0.92
NPIPA2E9PIF3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPIPA2E9PIF3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPIPA2E9PIF3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPIPA2E9PIF3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NPIPA2E9PIF3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
NPIPA2E9PIF3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPIPA2E9PIF3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NPIPA2E9PIF3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
NPIPA2E9PIF3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPIPA2E9PIF3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
NPIPA2E9PIF3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.77■□□□□ 0.91
NPIPA2E9PIF3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPIPA2E9PIF3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NPIPA2E9PIF3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPIPA2E9PIF3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NPIPA2E9PIF3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NPIPA2E9PIF3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NPIPA2E9PIF3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NPIPA2E9PIF3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NPIPA2E9PIF3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NPIPA2E9PIF3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPIPA2E9PIF3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPIPA2E9PIF3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPIPA2E9PIF3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NPIPA2E9PIF3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.75■□□□□ 0.91
NPIPA2E9PIF3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NPIPA2E9PIF3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPIPA2E9PIF3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPIPA2E9PIF3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NPIPA2E9PIF3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPIPA2E9PIF3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.74■□□□□ 0.91
NPIPA2E9PIF3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.74■□□□□ 0.91
NPIPA2E9PIF3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.74■□□□□ 0.91
NPIPA2E9PIF3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPIPA2E9PIF3 MIR935-201ENST00000401179 91 ntBASIC20.74■□□□□ 0.91
NPIPA2E9PIF3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.74■□□□□ 0.91
NPIPA2E9PIF3 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.74■□□□□ 0.91
NPIPA2E9PIF3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.74■□□□□ 0.91
NPIPA2E9PIF3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.74■□□□□ 0.91
NPIPA2E9PIF3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.74■□□□□ 0.91
NPIPA2E9PIF3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPIPA2E9PIF3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPIPA2E9PIF3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.73■□□□□ 0.91
NPIPA2E9PIF3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPIPA2E9PIF3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPIPA2E9PIF3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NPIPA2E9PIF3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.73■□□□□ 0.91
NPIPA2E9PIF3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPIPA2E9PIF3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPIPA2E9PIF3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
NPIPA2E9PIF3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
NPIPA2E9PIF3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.72■□□□□ 0.91
NPIPA2E9PIF3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.72■□□□□ 0.91
NPIPA2E9PIF3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.72■□□□□ 0.91
NPIPA2E9PIF3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPIPA2E9PIF3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms