Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 DUSP8P5-201ENST00000422884 1815 ntBASIC20.35■□□□□ 0.85
NPIPB4C9JG80 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.35■□□□□ 0.85
NPIPB4C9JG80 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.35■□□□□ 0.85
NPIPB4C9JG80 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
NPIPB4C9JG80 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPIPB4C9JG80 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPB4C9JG80 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.34■□□□□ 0.85
NPIPB4C9JG80 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPB4C9JG80 AC137630.3-201ENST00000607245 391 ntBASIC20.34■□□□□ 0.85
NPIPB4C9JG80 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPB4C9JG80 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPB4C9JG80 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.34■□□□□ 0.85
NPIPB4C9JG80 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPB4C9JG80 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPB4C9JG80 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPIPB4C9JG80 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPIPB4C9JG80 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPIPB4C9JG80 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.33■□□□□ 0.85
NPIPB4C9JG80 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPB4C9JG80 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NPIPB4C9JG80 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.32■□□□□ 0.84
NPIPB4C9JG80 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPB4C9JG80 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.32■□□□□ 0.84
NPIPB4C9JG80 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPB4C9JG80 AL031848.2-201ENST00000607670 837 ntBASIC20.32■□□□□ 0.84
NPIPB4C9JG80 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.32■□□□□ 0.84
NPIPB4C9JG80 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPB4C9JG80 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPB4C9JG80 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPB4C9JG80 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPB4C9JG80 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPB4C9JG80 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPB4C9JG80 AC092068.2-201ENST00000590491 1708 ntBASIC20.31■□□□□ 0.84
NPIPB4C9JG80 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPB4C9JG80 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPB4C9JG80 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NPIPB4C9JG80 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.31■□□□□ 0.84
NPIPB4C9JG80 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.31■□□□□ 0.84
NPIPB4C9JG80 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPB4C9JG80 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NPIPB4C9JG80 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPB4C9JG80 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.3■□□□□ 0.84
NPIPB4C9JG80 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.3■□□□□ 0.84
NPIPB4C9JG80 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPB4C9JG80 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.3■□□□□ 0.84
NPIPB4C9JG80 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NPIPB4C9JG80 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPB4C9JG80 KRT8P33-201ENST00000508125 1423 ntBASIC20.3■□□□□ 0.84
NPIPB4C9JG80 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.3■□□□□ 0.84
NPIPB4C9JG80 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPB4C9JG80 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NPIPB4C9JG80 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.3■□□□□ 0.84
NPIPB4C9JG80 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPB4C9JG80 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.3■□□□□ 0.84
NPIPB4C9JG80 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.29■□□□□ 0.84
NPIPB4C9JG80 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NPIPB4C9JG80 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.29■□□□□ 0.84
NPIPB4C9JG80 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPIPB4C9JG80 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPIPB4C9JG80 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPB4C9JG80 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NPIPB4C9JG80 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPB4C9JG80 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPB4C9JG80 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPB4C9JG80 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPB4C9JG80 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPB4C9JG80 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPB4C9JG80 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPB4C9JG80 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPB4C9JG80 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.28■□□□□ 0.84
NPIPB4C9JG80 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.28■□□□□ 0.84
NPIPB4C9JG80 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPB4C9JG80 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPB4C9JG80 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPB4C9JG80 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPB4C9JG80 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPB4C9JG80 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.27■□□□□ 0.84
NPIPB4C9JG80 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPB4C9JG80 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPB4C9JG80 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.27■□□□□ 0.84
NPIPB4C9JG80 SNX5-217ENST00000606557 1087 ntBASIC20.27■□□□□ 0.84
NPIPB4C9JG80 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.27■□□□□ 0.84
NPIPB4C9JG80 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPB4C9JG80 ANOS2P-203ENST00000472227 1816 ntBASIC20.27■□□□□ 0.84
NPIPB4C9JG80 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
NPIPB4C9JG80 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
NPIPB4C9JG80 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
NPIPB4C9JG80 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NPIPB4C9JG80 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPIPB4C9JG80 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPIPB4C9JG80 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NPIPB4C9JG80 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPIPB4C9JG80 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NPIPB4C9JG80 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPIPB4C9JG80 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.26■□□□□ 0.83
NPIPB4C9JG80 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.26■□□□□ 0.83
NPIPB4C9JG80 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.26■□□□□ 0.83
NPIPB4C9JG80 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
NPIPB4C9JG80 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.26■□□□□ 0.83
NPIPB4C9JG80 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms