Protein–RNA interactions for Protein: A1X283

SH3PXD2B, SH3 and PX domain-containing protein 2B, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2BA1X283 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH3PXD2BA1X283 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH3PXD2BA1X283 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.3■■□□□ 1
SH3PXD2BA1X283 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
SH3PXD2BA1X283 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.3■■□□□ 1
SH3PXD2BA1X283 ABHD17AP5-201ENST00000580133 923 ntBASIC21.3■■□□□ 1
SH3PXD2BA1X283 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.3■■□□□ 1
SH3PXD2BA1X283 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SH3PXD2BA1X283 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SH3PXD2BA1X283 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH3PXD2BA1X283 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH3PXD2BA1X283 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH3PXD2BA1X283 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SH3PXD2BA1X283 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3PXD2BA1X283 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.29■■□□□ 1
SH3PXD2BA1X283 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH3PXD2BA1X283 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3PXD2BA1X283 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.28■■□□□ 1
SH3PXD2BA1X283 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.28■■□□□ 1
SH3PXD2BA1X283 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.28■■□□□ 1
SH3PXD2BA1X283 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SH3PXD2BA1X283 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SH3PXD2BA1X283 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH3PXD2BA1X283 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.28■■□□□ 1
SH3PXD2BA1X283 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.28■■□□□ 1
SH3PXD2BA1X283 AC026202.3-201ENST00000600805 1127 ntBASIC21.28■■□□□ 1
SH3PXD2BA1X283 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SH3PXD2BA1X283 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SH3PXD2BA1X283 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
SH3PXD2BA1X283 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH3PXD2BA1X283 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH3PXD2BA1X283 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.27■■□□□ 1
SH3PXD2BA1X283 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH3PXD2BA1X283 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH3PXD2BA1X283 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.27■■□□□ 1
SH3PXD2BA1X283 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.27■■□□□ 1
SH3PXD2BA1X283 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
SH3PXD2BA1X283 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.27■■□□□ 1
SH3PXD2BA1X283 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.27■■□□□ 1
SH3PXD2BA1X283 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH3PXD2BA1X283 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.27■■□□□ 1
SH3PXD2BA1X283 AC137767.1-201ENST00000602918 1920 ntBASIC21.27■■□□□ 1
SH3PXD2BA1X283 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH3PXD2BA1X283 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
SH3PXD2BA1X283 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SH3PXD2BA1X283 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
SH3PXD2BA1X283 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SH3PXD2BA1X283 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.26■□□□□ 0.99
SH3PXD2BA1X283 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.26■□□□□ 0.99
SH3PXD2BA1X283 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.26■□□□□ 0.99
SH3PXD2BA1X283 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.26■□□□□ 0.99
SH3PXD2BA1X283 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3PXD2BA1X283 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SH3PXD2BA1X283 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3PXD2BA1X283 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3PXD2BA1X283 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3PXD2BA1X283 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3PXD2BA1X283 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3PXD2BA1X283 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3PXD2BA1X283 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SH3PXD2BA1X283 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.25■□□□□ 0.99
SH3PXD2BA1X283 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SH3PXD2BA1X283 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.25■□□□□ 0.99
SH3PXD2BA1X283 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SH3PXD2BA1X283 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3PXD2BA1X283 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3PXD2BA1X283 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3PXD2BA1X283 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.24■□□□□ 0.99
SH3PXD2BA1X283 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SH3PXD2BA1X283 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SH3PXD2BA1X283 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3PXD2BA1X283 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SH3PXD2BA1X283 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.24■□□□□ 0.99
SH3PXD2BA1X283 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3PXD2BA1X283 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3PXD2BA1X283 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3PXD2BA1X283 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
SH3PXD2BA1X283 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.23■□□□□ 0.99
SH3PXD2BA1X283 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SH3PXD2BA1X283 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.23■□□□□ 0.99
SH3PXD2BA1X283 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.23■□□□□ 0.99
SH3PXD2BA1X283 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3PXD2BA1X283 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3PXD2BA1X283 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.22■□□□□ 0.99
SH3PXD2BA1X283 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
SH3PXD2BA1X283 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3PXD2BA1X283 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SH3PXD2BA1X283 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SH3PXD2BA1X283 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SH3PXD2BA1X283 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
SH3PXD2BA1X283 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SH3PXD2BA1X283 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3PXD2BA1X283 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3PXD2BA1X283 AC233723.2-201ENST00000623798 2106 ntBASIC21.21■□□□□ 0.99
SH3PXD2BA1X283 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3PXD2BA1X283 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3PXD2BA1X283 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.21■□□□□ 0.99
SH3PXD2BA1X283 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.21■□□□□ 0.99
SH3PXD2BA1X283 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SH3PXD2BA1X283 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms