Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 ALDH1A3-203ENST00000557963 1670 ntBASIC24.05■■□□□ 1.44
TCRBV5S1A1TA0A578 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.05■■□□□ 1.44
TCRBV5S1A1TA0A578 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TCRBV5S1A1TA0A578 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.04■■□□□ 1.44
TCRBV5S1A1TA0A578 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TCRBV5S1A1TA0A578 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TCRBV5S1A1TA0A578 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TCRBV5S1A1TA0A578 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
TCRBV5S1A1TA0A578 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TCRBV5S1A1TA0A578 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.03■■□□□ 1.44
TCRBV5S1A1TA0A578 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TCRBV5S1A1TA0A578 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.03■■□□□ 1.44
TCRBV5S1A1TA0A578 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TCRBV5S1A1TA0A578 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TCRBV5S1A1TA0A578 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
TCRBV5S1A1TA0A578 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.03■■□□□ 1.44
TCRBV5S1A1TA0A578 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TCRBV5S1A1TA0A578 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TCRBV5S1A1TA0A578 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.03■■□□□ 1.44
TCRBV5S1A1TA0A578 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TCRBV5S1A1TA0A578 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TCRBV5S1A1TA0A578 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.02■■□□□ 1.44
TCRBV5S1A1TA0A578 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
TCRBV5S1A1TA0A578 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.02■■□□□ 1.44
TCRBV5S1A1TA0A578 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
TCRBV5S1A1TA0A578 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TCRBV5S1A1TA0A578 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
TCRBV5S1A1TA0A578 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.01■■□□□ 1.43
TCRBV5S1A1TA0A578 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TCRBV5S1A1TA0A578 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TCRBV5S1A1TA0A578 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.01■■□□□ 1.43
TCRBV5S1A1TA0A578 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
TCRBV5S1A1TA0A578 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TCRBV5S1A1TA0A578 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.01■■□□□ 1.43
TCRBV5S1A1TA0A578 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TCRBV5S1A1TA0A578 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.01■■□□□ 1.43
TCRBV5S1A1TA0A578 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
TCRBV5S1A1TA0A578 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TCRBV5S1A1TA0A578 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.01■■□□□ 1.43
TCRBV5S1A1TA0A578 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
TCRBV5S1A1TA0A578 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.01■■□□□ 1.43
TCRBV5S1A1TA0A578 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TCRBV5S1A1TA0A578 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TCRBV5S1A1TA0A578 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
TCRBV5S1A1TA0A578 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TCRBV5S1A1TA0A578 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TCRBV5S1A1TA0A578 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TCRBV5S1A1TA0A578 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
TCRBV5S1A1TA0A578 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24■■□□□ 1.43
TCRBV5S1A1TA0A578 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TCRBV5S1A1TA0A578 RARRES2P1-201ENST00000474487 481 ntBASIC23.99■■□□□ 1.43
TCRBV5S1A1TA0A578 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
TCRBV5S1A1TA0A578 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.99■■□□□ 1.43
TCRBV5S1A1TA0A578 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
TCRBV5S1A1TA0A578 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TCRBV5S1A1TA0A578 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TCRBV5S1A1TA0A578 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
TCRBV5S1A1TA0A578 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.99■■□□□ 1.43
TCRBV5S1A1TA0A578 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TCRBV5S1A1TA0A578 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.98■■□□□ 1.43
TCRBV5S1A1TA0A578 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.98■■□□□ 1.43
TCRBV5S1A1TA0A578 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.98■■□□□ 1.43
TCRBV5S1A1TA0A578 SNX5-217ENST00000606557 1087 ntBASIC23.98■■□□□ 1.43
TCRBV5S1A1TA0A578 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.98■■□□□ 1.43
TCRBV5S1A1TA0A578 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TCRBV5S1A1TA0A578 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TCRBV5S1A1TA0A578 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TCRBV5S1A1TA0A578 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.98■■□□□ 1.43
TCRBV5S1A1TA0A578 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TCRBV5S1A1TA0A578 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TCRBV5S1A1TA0A578 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TCRBV5S1A1TA0A578 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TCRBV5S1A1TA0A578 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
TCRBV5S1A1TA0A578 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TCRBV5S1A1TA0A578 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TCRBV5S1A1TA0A578 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TCRBV5S1A1TA0A578 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.97■■□□□ 1.43
TCRBV5S1A1TA0A578 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TCRBV5S1A1TA0A578 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TCRBV5S1A1TA0A578 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
TCRBV5S1A1TA0A578 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.97■■□□□ 1.43
TCRBV5S1A1TA0A578 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TCRBV5S1A1TA0A578 AC021242.3-201ENST00000607598 1377 ntBASIC23.97■■□□□ 1.43
TCRBV5S1A1TA0A578 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.97■■□□□ 1.43
TCRBV5S1A1TA0A578 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TCRBV5S1A1TA0A578 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.96■■□□□ 1.43
TCRBV5S1A1TA0A578 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TCRBV5S1A1TA0A578 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TCRBV5S1A1TA0A578 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.96■■□□□ 1.43
TCRBV5S1A1TA0A578 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.95■■□□□ 1.43
TCRBV5S1A1TA0A578 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
TCRBV5S1A1TA0A578 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.95■■□□□ 1.42
TCRBV5S1A1TA0A578 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
TCRBV5S1A1TA0A578 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
TCRBV5S1A1TA0A578 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.95■■□□□ 1.42
TCRBV5S1A1TA0A578 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.95■■□□□ 1.42
TCRBV5S1A1TA0A578 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
TCRBV5S1A1TA0A578 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TCRBV5S1A1TA0A578 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.95■■□□□ 1.42
TCRBV5S1A1TA0A578 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms