Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRAV34A0A0B4J273 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TRAV34A0A0B4J273 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV34A0A0B4J273 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV34A0A0B4J273 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV34A0A0B4J273 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV34A0A0B4J273 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV34A0A0B4J273 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV34A0A0B4J273 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV34A0A0B4J273 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TRAV34A0A0B4J273 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV34A0A0B4J273 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
TRAV34A0A0B4J273 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV34A0A0B4J273 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV34A0A0B4J273 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV34A0A0B4J273 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV34A0A0B4J273 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV34A0A0B4J273 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV34A0A0B4J273 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV34A0A0B4J273 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV34A0A0B4J273 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV34A0A0B4J273 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV34A0A0B4J273 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRAV34A0A0B4J273 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRAV34A0A0B4J273 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV34A0A0B4J273 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV34A0A0B4J273 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV34A0A0B4J273 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV34A0A0B4J273 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV34A0A0B4J273 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV34A0A0B4J273 LINC00565-201ENST00000562710 2331 ntBASIC17.56■□□□□ 0.4
TRAV34A0A0B4J273 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV34A0A0B4J273 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV34A0A0B4J273 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
TRAV34A0A0B4J273 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV34A0A0B4J273 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV34A0A0B4J273 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAV34A0A0B4J273 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV34A0A0B4J273 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV34A0A0B4J273 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV34A0A0B4J273 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV34A0A0B4J273 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRAV34A0A0B4J273 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV34A0A0B4J273 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV34A0A0B4J273 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV34A0A0B4J273 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.55■□□□□ 0.4
TRAV34A0A0B4J273 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.55■□□□□ 0.4
TRAV34A0A0B4J273 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV34A0A0B4J273 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV34A0A0B4J273 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRAV34A0A0B4J273 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV34A0A0B4J273 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV34A0A0B4J273 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV34A0A0B4J273 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV34A0A0B4J273 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRAV34A0A0B4J273 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV34A0A0B4J273 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV34A0A0B4J273 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV34A0A0B4J273 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV34A0A0B4J273 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV34A0A0B4J273 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 SLC25A24-204ENST00000569674 2357 ntBASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV34A0A0B4J273 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV34A0A0B4J273 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV34A0A0B4J273 AC025884.2-201ENST00000553429 711 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms