Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 AC135279.3-201ENST00000610945 1311 ntBASIC23.81■■□□□ 1.4
TRAV19A0A0A6YYK7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRAV19A0A0A6YYK7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRAV19A0A0A6YYK7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRAV19A0A0A6YYK7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TRAV19A0A0A6YYK7 DUX4L19-201ENST00000557448 1267 ntBASIC23.8■■□□□ 1.4
TRAV19A0A0A6YYK7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.8■■□□□ 1.4
TRAV19A0A0A6YYK7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.8■■□□□ 1.4
TRAV19A0A0A6YYK7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRAV19A0A0A6YYK7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAV19A0A0A6YYK7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.79■■□□□ 1.4
TRAV19A0A0A6YYK7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAV19A0A0A6YYK7 AC092171.4-201ENST00000609130 632 ntBASIC23.79■■□□□ 1.4
TRAV19A0A0A6YYK7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAV19A0A0A6YYK7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAV19A0A0A6YYK7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAV19A0A0A6YYK7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRAV19A0A0A6YYK7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRAV19A0A0A6YYK7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRAV19A0A0A6YYK7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.78■■□□□ 1.4
TRAV19A0A0A6YYK7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRAV19A0A0A6YYK7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.78■■□□□ 1.4
TRAV19A0A0A6YYK7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TRAV19A0A0A6YYK7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.78■■□□□ 1.4
TRAV19A0A0A6YYK7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRAV19A0A0A6YYK7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.78■■□□□ 1.4
TRAV19A0A0A6YYK7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRAV19A0A0A6YYK7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRAV19A0A0A6YYK7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRAV19A0A0A6YYK7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRAV19A0A0A6YYK7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAV19A0A0A6YYK7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAV19A0A0A6YYK7 AC024257.2-201ENST00000549699 147 ntBASIC23.77■■□□□ 1.4
TRAV19A0A0A6YYK7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRAV19A0A0A6YYK7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRAV19A0A0A6YYK7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRAV19A0A0A6YYK7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAV19A0A0A6YYK7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAV19A0A0A6YYK7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.77■■□□□ 1.4
TRAV19A0A0A6YYK7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRAV19A0A0A6YYK7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.76■■□□□ 1.39
TRAV19A0A0A6YYK7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TRAV19A0A0A6YYK7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRAV19A0A0A6YYK7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TRAV19A0A0A6YYK7 AC142381.2-201ENST00000566120 298 ntBASIC23.76■■□□□ 1.39
TRAV19A0A0A6YYK7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.76■■□□□ 1.39
TRAV19A0A0A6YYK7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.76■■□□□ 1.39
TRAV19A0A0A6YYK7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRAV19A0A0A6YYK7 AC009102.2-201ENST00000606772 1639 ntBASIC23.76■■□□□ 1.39
TRAV19A0A0A6YYK7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
TRAV19A0A0A6YYK7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.75■■□□□ 1.39
TRAV19A0A0A6YYK7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.75■■□□□ 1.39
TRAV19A0A0A6YYK7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRAV19A0A0A6YYK7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.75■■□□□ 1.39
TRAV19A0A0A6YYK7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.75■■□□□ 1.39
TRAV19A0A0A6YYK7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.75■■□□□ 1.39
TRAV19A0A0A6YYK7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRAV19A0A0A6YYK7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRAV19A0A0A6YYK7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
TRAV19A0A0A6YYK7 AC022211.4-201ENST00000625094 2161 ntBASIC23.74■■□□□ 1.39
TRAV19A0A0A6YYK7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRAV19A0A0A6YYK7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRAV19A0A0A6YYK7 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.74■■□□□ 1.39
TRAV19A0A0A6YYK7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRAV19A0A0A6YYK7 SYT6-210ENST00000641643 1587 ntBASIC23.74■■□□□ 1.39
TRAV19A0A0A6YYK7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.73■■□□□ 1.39
TRAV19A0A0A6YYK7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
TRAV19A0A0A6YYK7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.73■■□□□ 1.39
TRAV19A0A0A6YYK7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRAV19A0A0A6YYK7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.73■■□□□ 1.39
TRAV19A0A0A6YYK7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRAV19A0A0A6YYK7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
TRAV19A0A0A6YYK7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
TRAV19A0A0A6YYK7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
TRAV19A0A0A6YYK7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRAV19A0A0A6YYK7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRAV19A0A0A6YYK7 EDA-201ENST00000338901 1233 ntBASIC23.72■■□□□ 1.39
TRAV19A0A0A6YYK7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRAV19A0A0A6YYK7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRAV19A0A0A6YYK7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRAV19A0A0A6YYK7 AP003733.4-201ENST00000623785 1697 ntBASIC23.72■■□□□ 1.39
TRAV19A0A0A6YYK7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRAV19A0A0A6YYK7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRAV19A0A0A6YYK7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.71■■□□□ 1.39
TRAV19A0A0A6YYK7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.71■■□□□ 1.39
TRAV19A0A0A6YYK7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
TRAV19A0A0A6YYK7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.71■■□□□ 1.39
TRAV19A0A0A6YYK7 AC099791.2-201ENST00000605725 427 ntBASIC23.71■■□□□ 1.39
TRAV19A0A0A6YYK7 AL355001.2-201ENST00000620617 1191 ntBASIC23.71■■□□□ 1.39
TRAV19A0A0A6YYK7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
TRAV19A0A0A6YYK7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TRAV19A0A0A6YYK7 AL031432.3-201ENST00000607698 485 ntBASIC23.7■■□□□ 1.38
TRAV19A0A0A6YYK7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.7■■□□□ 1.38
TRAV19A0A0A6YYK7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRAV19A0A0A6YYK7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRAV19A0A0A6YYK7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRAV19A0A0A6YYK7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRAV19A0A0A6YYK7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRAV19A0A0A6YYK7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRAV19A0A0A6YYK7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms