Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV27A0A087WT01 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV27A0A087WT01 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV27A0A087WT01 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TRAV27A0A087WT01 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAV27A0A087WT01 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV27A0A087WT01 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV27A0A087WT01 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV27A0A087WT01 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV27A0A087WT01 AC011551.1-201ENST00000614101 683 ntBASIC20.71■□□□□ 0.91
TRAV27A0A087WT01 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.71■□□□□ 0.91
TRAV27A0A087WT01 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV27A0A087WT01 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV27A0A087WT01 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAV27A0A087WT01 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TRAV27A0A087WT01 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.7■□□□□ 0.9
TRAV27A0A087WT01 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV27A0A087WT01 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TRAV27A0A087WT01 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV27A0A087WT01 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV27A0A087WT01 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV27A0A087WT01 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAV27A0A087WT01 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV27A0A087WT01 AL161729.1-201ENST00000604104 1402 ntBASIC20.7■□□□□ 0.9
TRAV27A0A087WT01 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV27A0A087WT01 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV27A0A087WT01 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TRAV27A0A087WT01 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV27A0A087WT01 AL022069.1-201ENST00000568025 1636 ntBASIC20.69■□□□□ 0.9
TRAV27A0A087WT01 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.69■□□□□ 0.9
TRAV27A0A087WT01 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TRAV27A0A087WT01 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV27A0A087WT01 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV27A0A087WT01 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV27A0A087WT01 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAV27A0A087WT01 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRAV27A0A087WT01 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV27A0A087WT01 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.68■□□□□ 0.9
TRAV27A0A087WT01 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.68■□□□□ 0.9
TRAV27A0A087WT01 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.68■□□□□ 0.9
TRAV27A0A087WT01 AC019171.1-201ENST00000601251 1056 ntBASIC20.68■□□□□ 0.9
TRAV27A0A087WT01 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV27A0A087WT01 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAV27A0A087WT01 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAV27A0A087WT01 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV27A0A087WT01 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV27A0A087WT01 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV27A0A087WT01 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV27A0A087WT01 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV27A0A087WT01 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAV27A0A087WT01 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAV27A0A087WT01 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV27A0A087WT01 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV27A0A087WT01 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV27A0A087WT01 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRAV27A0A087WT01 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV27A0A087WT01 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV27A0A087WT01 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV27A0A087WT01 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.66■□□□□ 0.9
TRAV27A0A087WT01 BHLHE23-202ENST00000612929 1109 ntBASIC20.66■□□□□ 0.9
TRAV27A0A087WT01 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV27A0A087WT01 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRAV27A0A087WT01 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.66■□□□□ 0.9
TRAV27A0A087WT01 ANOS2P-203ENST00000472227 1816 ntBASIC20.66■□□□□ 0.9
TRAV27A0A087WT01 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV27A0A087WT01 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.65■□□□□ 0.9
TRAV27A0A087WT01 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV27A0A087WT01 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.65■□□□□ 0.9
TRAV27A0A087WT01 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV27A0A087WT01 AC004987.1-201ENST00000428627 508 ntBASIC20.65■□□□□ 0.9
TRAV27A0A087WT01 AC022616.5-201ENST00000518796 181 ntBASIC20.65■□□□□ 0.9
TRAV27A0A087WT01 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAV27A0A087WT01 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV27A0A087WT01 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV27A0A087WT01 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAV27A0A087WT01 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAV27A0A087WT01 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV27A0A087WT01 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.64■□□□□ 0.9
TRAV27A0A087WT01 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAV27A0A087WT01 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAV27A0A087WT01 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAV27A0A087WT01 AC131274.2-201ENST00000580697 1507 ntBASIC20.64■□□□□ 0.9
TRAV27A0A087WT01 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TRAV27A0A087WT01 ATP5G2P3-201ENST00000429083 425 ntBASIC20.64■□□□□ 0.89
TRAV27A0A087WT01 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV27A0A087WT01 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TRAV27A0A087WT01 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TRAV27A0A087WT01 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV27A0A087WT01 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV27A0A087WT01 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV27A0A087WT01 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRAV27A0A087WT01 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV27A0A087WT01 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV27A0A087WT01 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.63■□□□□ 0.89
TRAV27A0A087WT01 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV27A0A087WT01 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV27A0A087WT01 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV27A0A087WT01 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.63■□□□□ 0.89
TRAV27A0A087WT01 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV27A0A087WT01 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms