Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 AC098850.1-201ENST00000419919 790 ntBASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 AL162726.2-201ENST00000438986 1017 ntBASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 ELK1P1-201ENST00000485699 580 ntBASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 ENPP7P5-201ENST00000541031 1031 ntBASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 COQ6-210ENST00000554920 649 ntTSL 3 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 AC092364.2-202ENST00000597012 1073 ntBASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB4X5D2U9 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 AC140479.7-201ENST00000636301 2332 ntBASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 LILRP1-201ENST00000444199 1370 ntBASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HLA-DRB4X5D2U9 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms