Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 OR2I1P-210ENST00000642037 4691 ntBASIC17.01■□□□□ 0.31
CLIC4Q9Y696 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC4Q9Y696 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 AC016397.2-201ENST00000624848 1985 ntBASIC17■□□□□ 0.31
CLIC4Q9Y696 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 MRPL37P1-201ENST00000592451 1337 ntBASIC17■□□□□ 0.31
CLIC4Q9Y696 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17■□□□□ 0.31
CLIC4Q9Y696 RN7SL832P-201ENST00000607781 1756 ntBASIC17■□□□□ 0.31
CLIC4Q9Y696 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CLIC4Q9Y696 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17■□□□□ 0.31
CLIC4Q9Y696 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17■□□□□ 0.31
CLIC4Q9Y696 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17■□□□□ 0.31
CLIC4Q9Y696 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CLIC4Q9Y696 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17■□□□□ 0.31
CLIC4Q9Y696 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17■□□□□ 0.31
CLIC4Q9Y696 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17■□□□□ 0.31
CLIC4Q9Y696 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17■□□□□ 0.31
CLIC4Q9Y696 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLIC4Q9Y696 AC009486.1-201ENST00000569860 813 ntBASIC17■□□□□ 0.31
CLIC4Q9Y696 AL355385.1-201ENST00000606123 409 ntBASIC17■□□□□ 0.31
CLIC4Q9Y696 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17■□□□□ 0.31
CLIC4Q9Y696 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17■□□□□ 0.31
CLIC4Q9Y696 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17■□□□□ 0.31
CLIC4Q9Y696 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CLIC4Q9Y696 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17■□□□□ 0.31
CLIC4Q9Y696 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17■□□□□ 0.31
CLIC4Q9Y696 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLIC4Q9Y696 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC4Q9Y696 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 AC015688.4-201ENST00000580780 1647 ntBASIC16.99■□□□□ 0.31
CLIC4Q9Y696 AC134312.5-201ENST00000568031 1313 ntBASIC16.99■□□□□ 0.31
CLIC4Q9Y696 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 AC215219.1-201ENST00000400706 1817 ntBASIC16.99■□□□□ 0.31
CLIC4Q9Y696 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 BAATP1-201ENST00000412284 1225 ntBASIC16.99■□□□□ 0.31
CLIC4Q9Y696 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 AC012441.1-201ENST00000446669 685 ntBASIC16.99■□□□□ 0.31
CLIC4Q9Y696 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 AC138696.2-201ENST00000607376 223 ntBASIC16.99■□□□□ 0.31
CLIC4Q9Y696 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 AL138709.1-201ENST00000614840 1693 ntBASIC16.99■□□□□ 0.31
CLIC4Q9Y696 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.99■□□□□ 0.31
CLIC4Q9Y696 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms