Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 BX679664.3-201ENST00000414070 555 ntBASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 STK24P1-201ENST00000455035 1291 ntBASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 AC113935.1-201ENST00000471722 555 ntBASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 SRP14-204ENST00000558720 780 ntTSL 2 BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 KRT8P18-201ENST00000413425 1445 ntBASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC21.76■■□□□ 1.07
CDC42BPBQ9Y5S2 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 OR52M2P-201ENST00000414298 959 ntBASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 FOXN3-AS2-201ENST00000554071 1262 ntBASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 RN7SL556P-201ENST00000582856 298 ntBASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 RARS-210ENST00000626454 177 ntTSL 5 BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 PTGER4P2-201ENST00000328411 252 ntBASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 GRPEL2P1-201ENST00000453145 339 ntBASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 PTGER4P3-201ENST00000458150 252 ntBASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 RN7SL767P-201ENST00000493013 295 ntBASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 F11R-204ENST00000537746 1245 ntTSL 2 BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 VENTXP3-201ENST00000546480 773 ntBASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CDC42BPBQ9Y5S2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 AL109809.1-201ENST00000418979 1367 ntBASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 RN7SL582P-201ENST00000491078 279 ntBASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 KRT18P37-201ENST00000520711 1282 ntBASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 AP005264.5-201ENST00000590066 467 ntBASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 ODCP-201ENST00000459650 1639 ntBASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPBQ9Y5S2 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CDC42BPBQ9Y5S2 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms