Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RAI2Q9Y5P3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 MTHFR-210ENST00000641407 2387 ntBASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 SLC25A24P2-201ENST00000415059 510 ntBASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 AP003171.2-201ENST00000528208 925 ntBASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAI2Q9Y5P3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 MIR663B-201ENST00000408361 115 ntBASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 IGHJ2P-201ENST00000454480 60 ntBASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 RPL13AP20-201ENST00000459725 609 ntBASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 COX5BP1-201ENST00000507622 393 ntBASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.09■□□□□ 0.01
RAI2Q9Y5P3 AC008687.7-202ENST00000637404 953 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms