Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 RTN3P1-201ENST00000536295 711 ntBASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 AC005586.2-201ENST00000563946 837 ntBASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 PHBP15-201ENST00000574228 665 ntBASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 AC016629.1-201ENST00000596579 586 ntBASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 AL591471.1-201ENST00000621855 229 ntBASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SYNPO2Q9UMS6 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 FAM90A2P-201ENST00000511144 1395 ntBASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 FAM90A25P-201ENST00000528404 1395 ntBASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 CEP164P1-201ENST00000455142 418 ntBASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 AC026803.1-201ENST00000569130 274 ntBASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 MIR6769A-201ENST00000617340 73 ntBASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 AGGF1P1-201ENST00000509500 2073 ntBASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SYNPO2Q9UMS6 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 AC008741.2-201ENST00000612792 3115 ntBASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 AC018529.2-202ENST00000611482 3087 ntBASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms