Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 CCNC-217ENST00000523985 958 ntTSL 2 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 TUBBP5-203ENST00000508529 1334 ntBASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC19.73■□□□□ 0.75
NPC1L1Q9UHC9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 RCC2P8-201ENST00000502779 1035 ntBASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 AC020914.3-201ENST00000594712 304 ntBASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 AC244093.1-201ENST00000610837 814 ntBASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPC1L1Q9UHC9 TKT-201ENST00000296289 1931 ntTSL 5 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 AL596276.2-201ENST00000447525 331 ntBASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 AKR7A2P1-201ENST00000460134 915 ntBASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 SDHD-202ENST00000525291 790 ntTSL 3 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 MIR3615-201ENST00000581999 87 ntBASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 AC100757.4-201ENST00000626934 759 ntBASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 HSPA7-201ENST00000445535 1927 ntBASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
NPC1L1Q9UHC9 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 CRCP-204ENST00000398684 492 ntTSL 2 BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 AC244452.3-201ENST00000636814 210 ntBASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC19.7■□□□□ 0.74
NPC1L1Q9UHC9 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms