Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 MIR6069-201ENST00000620069 79 ntBASIC13.35□□□□□ -0.27
NLKQ9UBE8 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.35□□□□□ -0.27
NLKQ9UBE8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NLKQ9UBE8 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 AC083964.2-201ENST00000623988 2396 ntBASIC13.34□□□□□ -0.27
NLKQ9UBE8 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.34□□□□□ -0.27
NLKQ9UBE8 RPL37AP1-201ENST00000412502 279 ntBASIC13.34□□□□□ -0.27
NLKQ9UBE8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 AC027369.6-201ENST00000525520 931 ntBASIC13.34□□□□□ -0.27
NLKQ9UBE8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 HNRNPUP1-201ENST00000554987 333 ntBASIC13.34□□□□□ -0.27
NLKQ9UBE8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 AL138828.2-201ENST00000615812 383 ntBASIC13.34□□□□□ -0.27
NLKQ9UBE8 AC018442.1-201ENST00000421439 2061 ntBASIC13.34□□□□□ -0.27
NLKQ9UBE8 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.34□□□□□ -0.27
NLKQ9UBE8 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NLKQ9UBE8 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms