Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HACD3Q9P035 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.16■□□□□ 0.02
HACD3Q9P035 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HACD3Q9P035 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HACD3Q9P035 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.15■□□□□ 0.02
HACD3Q9P035 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HACD3Q9P035 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 MSTO2P-201ENST00000314835 1709 ntBASIC15.15■□□□□ 0.02
HACD3Q9P035 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.15■□□□□ 0.02
HACD3Q9P035 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.15■□□□□ 0.02
HACD3Q9P035 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.15■□□□□ 0.02
HACD3Q9P035 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.15■□□□□ 0.02
HACD3Q9P035 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.15■□□□□ 0.02
HACD3Q9P035 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.15■□□□□ 0.02
HACD3Q9P035 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.15■□□□□ 0.02
HACD3Q9P035 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.15■□□□□ 0.02
HACD3Q9P035 AC026434.2-201ENST00000506094 1078 ntBASIC15.15■□□□□ 0.02
HACD3Q9P035 SLC25A47P1-201ENST00000531577 414 ntBASIC15.15■□□□□ 0.02
HACD3Q9P035 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.15■□□□□ 0.02
HACD3Q9P035 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.15■□□□□ 0.02
HACD3Q9P035 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.15■□□□□ 0.02
HACD3Q9P035 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 RN7SL48P-201ENST00000579283 293 ntBASIC15.15■□□□□ 0.02
HACD3Q9P035 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HACD3Q9P035 AC233724.13-201ENST00000598383 410 ntBASIC15.15■□□□□ 0.02
HACD3Q9P035 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.15■□□□□ 0.02
HACD3Q9P035 AL022328.1-201ENST00000610050 478 ntBASIC15.15■□□□□ 0.02
HACD3Q9P035 AC023090.2-201ENST00000625182 2110 ntBASIC15.15■□□□□ 0.02
HACD3Q9P035 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.15■□□□□ 0.02
HACD3Q9P035 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HACD3Q9P035 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.15■□□□□ 0.02
HACD3Q9P035 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HACD3Q9P035 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.15■□□□□ 0.02
HACD3Q9P035 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HACD3Q9P035 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.15■□□□□ 0.02
HACD3Q9P035 AC005912.2-201ENST00000619492 2400 ntBASIC15.15■□□□□ 0.02
HACD3Q9P035 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HACD3Q9P035 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.15■□□□□ 0.02
HACD3Q9P035 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.15■□□□□ 0.02
HACD3Q9P035 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.15■□□□□ 0.02
HACD3Q9P035 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HACD3Q9P035 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.15■□□□□ 0.02
HACD3Q9P035 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HACD3Q9P035 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.15■□□□□ 0.02
HACD3Q9P035 SNX18-202ENST00000343017 3140 ntBASIC15.15■□□□□ 0.02
HACD3Q9P035 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HACD3Q9P035 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HACD3Q9P035 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HACD3Q9P035 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HACD3Q9P035 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HACD3Q9P035 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
HACD3Q9P035 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.14■□□□□ 0.01
HACD3Q9P035 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HACD3Q9P035 AC018665.1-201ENST00000622927 1362 ntBASIC15.14■□□□□ 0.01
HACD3Q9P035 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HACD3Q9P035 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
HACD3Q9P035 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HACD3Q9P035 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HACD3Q9P035 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.14■□□□□ 0.01
HACD3Q9P035 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.14■□□□□ 0.01
HACD3Q9P035 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HACD3Q9P035 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.14■□□□□ 0.01
HACD3Q9P035 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.14■□□□□ 0.01
HACD3Q9P035 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HACD3Q9P035 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HACD3Q9P035 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.14■□□□□ 0.01
HACD3Q9P035 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HACD3Q9P035 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HACD3Q9P035 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HACD3Q9P035 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HACD3Q9P035 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HACD3Q9P035 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.14■□□□□ 0.01
HACD3Q9P035 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.14■□□□□ 0.01
HACD3Q9P035 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HACD3Q9P035 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.14■□□□□ 0.01
HACD3Q9P035 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.14■□□□□ 0.01
HACD3Q9P035 USP32P1-208ENST00000506594 1164 ntBASIC15.14■□□□□ 0.01
HACD3Q9P035 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.14■□□□□ 0.01
HACD3Q9P035 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.14■□□□□ 0.01
HACD3Q9P035 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HACD3Q9P035 AC132938.2-201ENST00000579188 680 ntBASIC15.14■□□□□ 0.01
HACD3Q9P035 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HACD3Q9P035 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.14■□□□□ 0.01
HACD3Q9P035 AC008735.3-201ENST00000596646 500 ntBASIC15.14■□□□□ 0.01
HACD3Q9P035 AC012645.4-201ENST00000610691 1061 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms