Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.03□□□□□ -0.16
CNIH4Q9P003 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNIH4Q9P003 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CNIH4Q9P003 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.16
CNIH4Q9P003 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CNIH4Q9P003 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CNIH4Q9P003 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CNIH4Q9P003 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.02□□□□□ -0.16
CNIH4Q9P003 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CNIH4Q9P003 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.02□□□□□ -0.16
CNIH4Q9P003 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CNIH4Q9P003 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.02□□□□□ -0.16
CNIH4Q9P003 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CNIH4Q9P003 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.02□□□□□ -0.16
CNIH4Q9P003 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CNIH4Q9P003 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CNIH4Q9P003 AC007551.1-201ENST00000457394 519 ntBASIC14.02□□□□□ -0.17
CNIH4Q9P003 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.02□□□□□ -0.17
CNIH4Q9P003 AC104989.1-201ENST00000519711 778 ntBASIC14.02□□□□□ -0.17
CNIH4Q9P003 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CNIH4Q9P003 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.02□□□□□ -0.17
CNIH4Q9P003 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.02□□□□□ -0.17
CNIH4Q9P003 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.02□□□□□ -0.17
CNIH4Q9P003 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.02□□□□□ -0.17
CNIH4Q9P003 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.02□□□□□ -0.17
CNIH4Q9P003 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.02□□□□□ -0.17
CNIH4Q9P003 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CNIH4Q9P003 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CNIH4Q9P003 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CNIH4Q9P003 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.02□□□□□ -0.17
CNIH4Q9P003 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CNIH4Q9P003 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
CNIH4Q9P003 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNIH4Q9P003 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CNIH4Q9P003 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
CNIH4Q9P003 MSTO2P-201ENST00000314835 1709 ntBASIC14.01□□□□□ -0.17
CNIH4Q9P003 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNIH4Q9P003 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNIH4Q9P003 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNIH4Q9P003 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNIH4Q9P003 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNIH4Q9P003 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNIH4Q9P003 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNIH4Q9P003 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNIH4Q9P003 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNIH4Q9P003 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 RNU1-114P-201ENST00000365297 166 ntBASIC14.01□□□□□ -0.17
CNIH4Q9P003 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNIH4Q9P003 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNIH4Q9P003 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNIH4Q9P003 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 AC132938.4-201ENST00000623835 848 ntBASIC14.01□□□□□ -0.17
CNIH4Q9P003 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNIH4Q9P003 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CNIH4Q9P003 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms