Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 AL137783.1-201ENST00000623494 1896 ntBASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 AL157414.3-201ENST00000624276 1954 ntBASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 AC092933.1-201ENST00000393644 945 ntBASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 TMEM14DP-201ENST00000422205 345 ntBASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 AC007551.1-201ENST00000457394 519 ntBASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 AC025279.2-201ENST00000569730 653 ntBASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 AC055811.4-201ENST00000624039 1754 ntBASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PARPBPQ9NWS1 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 AL359258.3-201ENST00000622910 2331 ntBASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
PARPBPQ9NWS1 AGAP7P-201ENST00000582299 2062 ntBASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms