Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 SPDYE18-201ENST00000510091 1050 ntBASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 AF228730.6-201ENST00000641497 218 ntBASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 AC084121.3-201ENST00000641716 218 ntBASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 CICP4-201ENST00000447359 2812 ntBASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
LIN7CQ9NUP9 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 DFFBP1-201ENST00000433250 979 ntBASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 AC022447.6-201ENST00000515522 438 ntBASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 AC055876.2-201ENST00000531834 546 ntBASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 RARRES2P5-201ENST00000564013 466 ntBASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 AC036164.1-201ENST00000570544 333 ntBASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 MIR3197-201ENST00000582241 73 ntBASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 AC000095.1-201ENST00000603208 874 ntBASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 AC092053.3-201ENST00000641308 4975 ntBASIC12.47□□□□□ -0.41
LIN7CQ9NUP9 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms