Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.15□□□□□ -0.3
KIAA1549Q9HCM3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.15□□□□□ -0.3
KIAA1549Q9HCM3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.15□□□□□ -0.3
KIAA1549Q9HCM3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.15□□□□□ -0.3
KIAA1549Q9HCM3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
KIAA1549Q9HCM3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
KIAA1549Q9HCM3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
KIAA1549Q9HCM3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KIAA1549Q9HCM3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KIAA1549Q9HCM3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
KIAA1549Q9HCM3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.15□□□□□ -0.3
KIAA1549Q9HCM3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KIAA1549Q9HCM3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
KIAA1549Q9HCM3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KIAA1549Q9HCM3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KIAA1549Q9HCM3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
KIAA1549Q9HCM3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
KIAA1549Q9HCM3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.31
KIAA1549Q9HCM3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
KIAA1549Q9HCM3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
KIAA1549Q9HCM3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 AL645933.1-201ENST00000440087 609 ntBASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 OR2R1P-201ENST00000441404 914 ntBASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 UPF3AP2-201ENST00000457924 1132 ntBASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 RPL18P13-201ENST00000478088 569 ntBASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 AC125604.1-201ENST00000496255 707 ntBASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 AC116345.2-201ENST00000512837 523 ntBASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 AC008805.1-201ENST00000590892 364 ntBASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 AC091812.3-201ENST00000621362 345 ntBASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 MIR769-201ENST00000390225 118 ntBASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 AC021723.1-201ENST00000486306 515 ntBASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 AC084346.2-201ENST00000607097 949 ntBASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 KRT8P21-201ENST00000430398 1491 ntBASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 KRT8P19-201ENST00000551916 1455 ntBASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.14□□□□□ -0.31
KIAA1549Q9HCM3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.13□□□□□ -0.31
KIAA1549Q9HCM3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
KIAA1549Q9HCM3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
KIAA1549Q9HCM3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KIAA1549Q9HCM3 FAM90A7P-201ENST00000382628 1395 ntBASIC13.13□□□□□ -0.31
KIAA1549Q9HCM3 FAM90A23P-201ENST00000400136 1395 ntBASIC13.13□□□□□ -0.31
KIAA1549Q9HCM3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KIAA1549Q9HCM3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
KIAA1549Q9HCM3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.13□□□□□ -0.31
KIAA1549Q9HCM3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KIAA1549Q9HCM3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms