Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 AL157414.3-201ENST00000624276 1954 ntBASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 RN7SL399P-201ENST00000471648 279 ntBASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 AC004890.2-204ENST00000481968 304 ntBASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 BX539320.1-201ENST00000623759 877 ntBASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 AL137783.1-201ENST00000623494 1896 ntBASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.86□□□□□ -0.19
POLR2J3Q9H1A7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 AC055876.3-201ENST00000431496 288 ntBASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 AC022447.6-201ENST00000515522 438 ntBASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 DUX4L47-201ENST00000566374 394 ntBASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 AC008738.7-201ENST00000609744 511 ntBASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 AC138649.4-201ENST00000612222 287 ntBASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 AL662799.1-202ENST00000614205 422 ntBASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 AC004840.1-201ENST00000636359 365 ntBASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 AC023090.2-201ENST00000625182 2110 ntBASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 AL354702.1-201ENST00000442006 1960 ntBASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
POLR2J3Q9H1A7 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
POLR2J3Q9H1A7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
POLR2J3Q9H1A7 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms