Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 AL627422.1-201ENST00000434104 580 ntBASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 LYPLA2P1-203ENST00000447689 696 ntBASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 AL118516.1-201ENST00000564152 670 ntBASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 AC107464.3-201ENST00000609172 737 ntBASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 PLS3-210ENST00000626746 216 ntTSL 4 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2OQ9C0C9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.39■□□□□ 0.22
UBE2OQ9C0C9 AC010491.1-201ENST00000563101 2797 ntBASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 AP000593.2-201ENST00000542775 1433 ntBASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 AL583805.1-201ENST00000391389 531 ntBASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 AC012441.2-201ENST00000444843 739 ntBASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 AC004466.1-201ENST00000599515 1080 ntBASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 LINC01783-202ENST00000614408 828 ntBASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 BX284668.2-205ENST00000619677 828 ntBASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2OQ9C0C9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2OQ9C0C9 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2OQ9C0C9 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.38■□□□□ 0.21
UBE2OQ9C0C9 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.38■□□□□ 0.21
UBE2OQ9C0C9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2OQ9C0C9 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
UBE2OQ9C0C9 NHP2-202ENST00000314397 599 ntTSL 2 BASIC16.38■□□□□ 0.21
UBE2OQ9C0C9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.38■□□□□ 0.21
UBE2OQ9C0C9 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
UBE2OQ9C0C9 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2OQ9C0C9 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.38■□□□□ 0.21
UBE2OQ9C0C9 BCAS2P2-201ENST00000425064 674 ntBASIC16.38■□□□□ 0.21
UBE2OQ9C0C9 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.38■□□□□ 0.21
UBE2OQ9C0C9 AP000358.1-201ENST00000456260 156 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms