Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 AC134312.5-201ENST00000568031 1313 ntBASIC13.64□□□□□ -0.23
RSPO3Q9BXY4 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 KRT18P25-201ENST00000508931 1278 ntBASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 ENPP7P14-201ENST00000621765 1040 ntBASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 AGAP10P-201ENST00000454844 2418 ntBASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 FKBP4P6-201ENST00000457486 1332 ntBASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 AC090643.2-201ENST00000623442 2029 ntBASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO3Q9BXY4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 RN7SKP175-201ENST00000408472 289 ntBASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 AP001889.1-201ENST00000525414 633 ntBASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 MIR4745-201ENST00000577608 62 ntBASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 MIR6074-201ENST00000612054 107 ntBASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RSPO3Q9BXY4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms