Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 AC009477.1-201ENST00000452936 217 ntBASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 VDAC1P7-201ENST00000462417 847 ntBASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 FAM86LP-201ENST00000478302 853 ntBASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 AL049840.4-201ENST00000602422 811 ntBASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 AC016397.2-201ENST00000624848 1985 ntBASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 CICP16-201ENST00000502609 2813 ntBASIC12.65□□□□□ -0.38
HDHD3Q9BSH5 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.65□□□□□ -0.39
HDHD3Q9BSH5 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 AC107918.4-201ENST00000641966 3141 ntBASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 MIR943-201ENST00000401286 94 ntBASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 AC026410.3-201ENST00000514280 936 ntBASIC12.64□□□□□ -0.39
HDHD3Q9BSH5 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms