Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMOQ99835 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.55■□□□□ 0.08
SMOQ99835 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMOQ99835 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMOQ99835 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SMOQ99835 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SMOQ99835 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SMOQ99835 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.54■□□□□ 0.08
SMOQ99835 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 KRT8P28-201ENST00000433288 1390 ntBASIC15.54■□□□□ 0.08
SMOQ99835 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.54■□□□□ 0.08
SMOQ99835 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.54■□□□□ 0.08
SMOQ99835 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.54■□□□□ 0.08
SMOQ99835 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SMOQ99835 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.54■□□□□ 0.08
SMOQ99835 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.54■□□□□ 0.08
SMOQ99835 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.54■□□□□ 0.08
SMOQ99835 NKAIN1P1-201ENST00000435754 582 ntBASIC15.54■□□□□ 0.08
SMOQ99835 AL157407.1-201ENST00000435784 904 ntBASIC15.54■□□□□ 0.08
SMOQ99835 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.54■□□□□ 0.08
SMOQ99835 AL035414.1-201ENST00000451327 857 ntBASIC15.54■□□□□ 0.08
SMOQ99835 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.54■□□□□ 0.08
SMOQ99835 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 TUBB8P8-201ENST00000458717 1058 ntBASIC15.54■□□□□ 0.08
SMOQ99835 SERPINA13P-202ENST00000478994 924 ntBASIC15.54■□□□□ 0.08
SMOQ99835 AC044849.1-201ENST00000519737 1188 ntBASIC15.54■□□□□ 0.08
SMOQ99835 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.54■□□□□ 0.08
SMOQ99835 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SMOQ99835 MIR3615-201ENST00000581999 87 ntBASIC15.54■□□□□ 0.08
SMOQ99835 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SMOQ99835 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.54■□□□□ 0.08
SMOQ99835 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.54■□□□□ 0.08
SMOQ99835 AL451050.2-201ENST00000606967 682 ntBASIC15.54■□□□□ 0.08
SMOQ99835 AC244093.1-201ENST00000610837 814 ntBASIC15.54■□□□□ 0.08
SMOQ99835 MIR6720-201ENST00000611664 98 ntBASIC15.54■□□□□ 0.08
SMOQ99835 MIR6787-201ENST00000616675 61 ntBASIC15.54■□□□□ 0.08
SMOQ99835 AL023803.2-201ENST00000620080 638 ntBASIC15.54■□□□□ 0.08
SMOQ99835 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SMOQ99835 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.54■□□□□ 0.08
SMOQ99835 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.54■□□□□ 0.08
SMOQ99835 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SMOQ99835 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
SMOQ99835 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMOQ99835 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.54■□□□□ 0.08
SMOQ99835 AC015688.4-201ENST00000580780 1647 ntBASIC15.54■□□□□ 0.08
SMOQ99835 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SMOQ99835 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMOQ99835 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMOQ99835 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMOQ99835 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SMOQ99835 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMOQ99835 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.53■□□□□ 0.08
SMOQ99835 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.53■□□□□ 0.08
SMOQ99835 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMOQ99835 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SMOQ99835 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SMOQ99835 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMOQ99835 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMOQ99835 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMOQ99835 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMOQ99835 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.53■□□□□ 0.08
SMOQ99835 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.53■□□□□ 0.08
SMOQ99835 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SMOQ99835 AL645933.1-201ENST00000440087 609 ntBASIC15.53■□□□□ 0.08
SMOQ99835 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.53■□□□□ 0.08
SMOQ99835 AP001258.2-201ENST00000529891 490 ntBASIC15.53■□□□□ 0.08
SMOQ99835 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.53■□□□□ 0.08
SMOQ99835 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.53■□□□□ 0.08
SMOQ99835 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
SMOQ99835 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.53■□□□□ 0.08
SMOQ99835 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.53■□□□□ 0.08
SMOQ99835 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.53■□□□□ 0.08
SMOQ99835 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SMOQ99835 AC004899.1-201ENST00000424687 1714 ntBASIC15.53■□□□□ 0.08
SMOQ99835 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.53■□□□□ 0.08
SMOQ99835 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SMOQ99835 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.53■□□□□ 0.08
SMOQ99835 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMOQ99835 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SMOQ99835 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms