Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AC106881.1-201ENST00000605849 3329 ntBASIC12.53□□□□□ -0.4
CCL13Q99616 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL13Q99616 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
CCL13Q99616 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL13Q99616 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL13Q99616 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 OR8S1-201ENST00000310194 1080 ntBASIC12.53□□□□□ -0.4
CCL13Q99616 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL13Q99616 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL13Q99616 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 MIR1202-201ENST00000408529 83 ntBASIC12.53□□□□□ -0.4
CCL13Q99616 ARSEP1-201ENST00000420443 635 ntBASIC12.53□□□□□ -0.4
CCL13Q99616 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL13Q99616 FAM8A4P-201ENST00000435433 1213 ntBASIC12.53□□□□□ -0.4
CCL13Q99616 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 FTLP10-202ENST00000505798 471 ntBASIC12.53□□□□□ -0.4
CCL13Q99616 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.53□□□□□ -0.4
CCL13Q99616 AP000812.2-201ENST00000538934 718 ntBASIC12.53□□□□□ -0.4
CCL13Q99616 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL13Q99616 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.53□□□□□ -0.4
CCL13Q99616 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL13Q99616 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL13Q99616 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL13Q99616 AC017083.2-201ENST00000608069 979 ntBASIC12.53□□□□□ -0.4
CCL13Q99616 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CCL13Q99616 RHOXF1P1-202ENST00000635473 501 ntBASIC12.53□□□□□ -0.4
CCL13Q99616 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL13Q99616 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL13Q99616 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL13Q99616 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL13Q99616 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CCL13Q99616 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL13Q99616 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
CCL13Q99616 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL13Q99616 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CCL13Q99616 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CCL13Q99616 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
CCL13Q99616 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 LINC01101-201ENST00000622953 1884 ntBASIC12.53□□□□□ -0.4
CCL13Q99616 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CCL13Q99616 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL13Q99616 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL13Q99616 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL13Q99616 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL13Q99616 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CCL13Q99616 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CCL13Q99616 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
CCL13Q99616 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL13Q99616 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.52□□□□□ -0.4
CCL13Q99616 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL13Q99616 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
CCL13Q99616 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL13Q99616 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL13Q99616 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.52□□□□□ -0.4
CCL13Q99616 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.52□□□□□ -0.4
CCL13Q99616 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.4
CCL13Q99616 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL13Q99616 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CCL13Q99616 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CCL13Q99616 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
CCL13Q99616 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 ANKRD19P-201ENST00000338192 862 ntBASIC12.52□□□□□ -0.41
CCL13Q99616 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CCL13Q99616 MIR658-201ENST00000385210 100 ntBASIC12.52□□□□□ -0.41
CCL13Q99616 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CCL13Q99616 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.52□□□□□ -0.41
CCL13Q99616 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 MESTP3-201ENST00000503460 968 ntBASIC12.52□□□□□ -0.41
CCL13Q99616 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.52□□□□□ -0.41
CCL13Q99616 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.52□□□□□ -0.41
CCL13Q99616 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL13Q99616 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.52□□□□□ -0.41
CCL13Q99616 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms