Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 AL136172.1-201ENST00000598590 1394 ntBASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 GPAA1P2-201ENST00000417923 928 ntBASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 AC103810.3-201ENST00000583567 96 ntBASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 AC009884.2-201ENST00000603110 324 ntBASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 MIR6787-201ENST00000616675 61 ntBASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 AC244452.3-201ENST00000636814 210 ntBASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 OR2I1P-209ENST00000641730 5365 ntBASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.44■□□□□ 0.06
CDK5RAP1Q96SZ6 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 SERPINA13P-202ENST00000478994 924 ntBASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 AC106794.1-201ENST00000506935 792 ntBASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.43■□□□□ 0.06
CDK5RAP1Q96SZ6 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms