Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.21□□□□□ -0.13
BBS4Q96RK4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
BBS4Q96RK4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
BBS4Q96RK4 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.21□□□□□ -0.13
BBS4Q96RK4 DGCR5-201ENST00000399539 862 ntBASIC14.21□□□□□ -0.13
BBS4Q96RK4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BBS4Q96RK4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BBS4Q96RK4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.21□□□□□ -0.13
BBS4Q96RK4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS4Q96RK4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.21□□□□□ -0.13
BBS4Q96RK4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BBS4Q96RK4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.21□□□□□ -0.13
BBS4Q96RK4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.21□□□□□ -0.13
BBS4Q96RK4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.21□□□□□ -0.13
BBS4Q96RK4 CLUHP6-201ENST00000580789 941 ntBASIC14.21□□□□□ -0.13
BBS4Q96RK4 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS4Q96RK4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS4Q96RK4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.21□□□□□ -0.13
BBS4Q96RK4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.21□□□□□ -0.13
BBS4Q96RK4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BBS4Q96RK4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.21□□□□□ -0.13
BBS4Q96RK4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
BBS4Q96RK4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
BBS4Q96RK4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
BBS4Q96RK4 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
BBS4Q96RK4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
BBS4Q96RK4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.21□□□□□ -0.14
BBS4Q96RK4 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
BBS4Q96RK4 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
BBS4Q96RK4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
BBS4Q96RK4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
BBS4Q96RK4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.21□□□□□ -0.14
BBS4Q96RK4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 AC131212.3-201ENST00000624087 4219 ntBASIC14.2□□□□□ -0.14
BBS4Q96RK4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 AL031595.1-201ENST00000623969 4709 ntBASIC14.2□□□□□ -0.14
BBS4Q96RK4 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 AC093433.1-201ENST00000458048 571 ntBASIC14.2□□□□□ -0.14
BBS4Q96RK4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 AC026434.2-201ENST00000506094 1078 ntBASIC14.2□□□□□ -0.14
BBS4Q96RK4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.2□□□□□ -0.14
BBS4Q96RK4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 AC092053.3-201ENST00000641308 4975 ntBASIC14.2□□□□□ -0.14
BBS4Q96RK4 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
BBS4Q96RK4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
BBS4Q96RK4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BBS4Q96RK4 AC139749.1-202ENST00000617529 3139 ntBASIC14.19□□□□□ -0.14
BBS4Q96RK4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.19□□□□□ -0.14
BBS4Q96RK4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BBS4Q96RK4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BBS4Q96RK4 AC113367.3-201ENST00000508316 1912 ntBASIC14.19□□□□□ -0.14
BBS4Q96RK4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BBS4Q96RK4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
BBS4Q96RK4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.19□□□□□ -0.14
BBS4Q96RK4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
BBS4Q96RK4 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
BBS4Q96RK4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
BBS4Q96RK4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.19□□□□□ -0.14
BBS4Q96RK4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.19□□□□□ -0.14
BBS4Q96RK4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
BBS4Q96RK4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms