Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 TLE1P1-201ENST00000422965 589 ntBASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 AC090857.1-201ENST00000527400 390 ntBASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 REXO1L2P-201ENST00000425429 2069 ntBASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNGAP1Q96PV0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 LILRP1-201ENST00000444199 1370 ntBASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 AC099063.4-201ENST00000641099 1602 ntBASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNGAP1Q96PV0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 KLF2P1-201ENST00000447438 1042 ntBASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 AC116345.2-201ENST00000512837 523 ntBASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.87■□□□□ 0.29
SYNGAP1Q96PV0 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms