Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.18□□□□□ -0.14
COL21A1Q96P44 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL21A1Q96P44 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL21A1Q96P44 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL21A1Q96P44 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL21A1Q96P44 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.18□□□□□ -0.14
COL21A1Q96P44 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL21A1Q96P44 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
COL21A1Q96P44 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL21A1Q96P44 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.18□□□□□ -0.14
COL21A1Q96P44 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 AL360270.3-201ENST00000609118 1348 ntBASIC14.17□□□□□ -0.14
COL21A1Q96P44 AC113367.3-201ENST00000508316 1912 ntBASIC14.17□□□□□ -0.14
COL21A1Q96P44 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 AL157414.3-201ENST00000624276 1954 ntBASIC14.17□□□□□ -0.14
COL21A1Q96P44 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 RN7SL752P-201ENST00000463779 287 ntBASIC14.17□□□□□ -0.14
COL21A1Q96P44 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 AL596325.1-201ENST00000563991 1082 ntBASIC14.17□□□□□ -0.14
COL21A1Q96P44 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 CU634019.7-201ENST00000624153 1185 ntBASIC14.17□□□□□ -0.14
COL21A1Q96P44 FP236241.2-201ENST00000624906 1185 ntBASIC14.17□□□□□ -0.14
COL21A1Q96P44 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 AC097359.2-201ENST00000604992 2389 ntBASIC14.17□□□□□ -0.14
COL21A1Q96P44 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COL21A1Q96P44 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
COL21A1Q96P44 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
COL21A1Q96P44 AL928921.2-201ENST00000641325 2442 ntBASIC14.16□□□□□ -0.14
COL21A1Q96P44 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
COL21A1Q96P44 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 AC005252.3-201ENST00000623855 2258 ntBASIC14.16□□□□□ -0.14
COL21A1Q96P44 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
COL21A1Q96P44 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.16□□□□□ -0.14
COL21A1Q96P44 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.16□□□□□ -0.14
COL21A1Q96P44 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.16□□□□□ -0.14
COL21A1Q96P44 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.16□□□□□ -0.14
COL21A1Q96P44 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.16□□□□□ -0.14
COL21A1Q96P44 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.16□□□□□ -0.14
COL21A1Q96P44 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.16□□□□□ -0.14
COL21A1Q96P44 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.16□□□□□ -0.14
COL21A1Q96P44 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.16□□□□□ -0.14
COL21A1Q96P44 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
COL21A1Q96P44 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.16□□□□□ -0.14
COL21A1Q96P44 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms