Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 AP001889.1-201ENST00000525414 633 ntBASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 AC008735.3-201ENST00000596646 500 ntBASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP3Q96JB5 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 AC005229.1-201ENST00000392885 409 ntBASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 COX5BP8-201ENST00000416911 349 ntBASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 AC007969.1-201ENST00000433675 447 ntBASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 C2orf27AP3-201ENST00000434123 579 ntBASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 AC245100.3-201ENST00000441281 285 ntBASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 BCRP2-202ENST00000447763 634 ntBASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 BCRP6-201ENST00000510112 632 ntBASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 BCRP7-201ENST00000511549 544 ntBASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 SLC25A47P1-201ENST00000531577 414 ntBASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 AC233724.13-201ENST00000598383 410 ntBASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 AL022328.1-201ENST00000610050 478 ntBASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 AL354718.3-201ENST00000616414 581 ntBASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 IGHV3-72-202ENST00000621503 303 ntBASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 CR382287.1-201ENST00000623954 586 ntBASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP3Q96JB5 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 SALL4P5-201ENST00000419001 1760 ntBASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 TMEM14DP-201ENST00000422205 345 ntBASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK5RAP3Q96JB5 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms