Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 AL512384.1-201ENST00000406683 331 ntBASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 C2orf27AP3-201ENST00000434123 579 ntBASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 INE1-201ENST00000456273 945 ntBASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 BTNL10-201ENST00000595971 695 ntBASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 AC008735.3-201ENST00000596646 500 ntBASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 AL354718.3-201ENST00000616414 581 ntBASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 CR382287.1-201ENST00000623954 586 ntBASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 AC005840.4-201ENST00000541242 2494 ntBASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.53□□□□□ -0.08
PDLIM5Q96HC4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDLIM5Q96HC4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.52□□□□□ -0.08
PDLIM5Q96HC4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.52□□□□□ -0.08
PDLIM5Q96HC4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
PDLIM5Q96HC4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PDLIM5Q96HC4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PDLIM5Q96HC4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDLIM5Q96HC4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PDLIM5Q96HC4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
PDLIM5Q96HC4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDLIM5Q96HC4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.52□□□□□ -0.08
PDLIM5Q96HC4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.52□□□□□ -0.08
PDLIM5Q96HC4 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 AC004945.1-201ENST00000416738 983 ntBASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 AC016694.1-201ENST00000434179 700 ntBASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 AC006453.4-201ENST00000636949 1252 ntBASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PDLIM5Q96HC4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms